RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	SAT1	P21673	171 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	CERS1	P27544	350 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	AHR	P35869	848 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	SOX3	P41225	446 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	MAGEA5	P43359	124 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	DNASE1L1	P49184	302 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	RGS4	P49798	205 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	SSR4	P51571	173 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	CLCN2	P51788	898 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	GPR143	P51810	404 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	DLX5	P56178	289 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	BTN3A2	P78410	334 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	SARNP	P82979	210 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	PLGLB1	Q02325	96 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	RUNX2	Q13950	521 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	FHL2	Q14192	279 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	RBBP5	Q15291	538 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	KRTAP21-3	Q3LHN1	58 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	RNASEH2B	Q5TBB1	312 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	HECTD2	Q5U5R9	776 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	DUPD1	Q68J44	220 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	RTL6	Q6ICC9	239 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	ARHGAP11A	Q6P4F7	1023 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	ABHD17C	Q6PCB6	329 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	IL20RB	Q6UXL0	311 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	LHFPL2	Q6ZUX7	228 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	THOC6	Q86W42	341 aa	Known RBP	5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	LIX1L	Q8IVB5	337 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	CCDC103	Q8IW40	242 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	LMNTD2	Q8IXW0	634 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	MMP21	Q8N119	569 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	EID3	Q8N140	333 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	TMEM156	Q8N614	296 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	GPATCH11	Q8N954	259 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	POGLUT1	Q8NBL1	392 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	MCU	Q8NE86	351 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	OR5M3	Q8NGP4	307 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	OR2W6P	Q8NHA6	318 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	LILRB4	Q8NHJ6	448 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	CREB3L4	Q8TEY5	395 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	MAIP1	Q8WWC4	291 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	ASB5	Q8WWX0	329 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	RND1	Q92730	232 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	SLCO2A1	Q92959	643 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	CERS2	Q96G23	380 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	VMP1	Q96GC9	406 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	SMIM10	Q96HG1	83 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	RASL10B	Q96S79	203 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	CNPPD1	Q9BV87	410 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	FAM129A	Q9BZQ8	928 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	ZDHHC11	Q9H8X9	412 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	TAS2R13	Q9NYV9	303 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965		Q9UFV3	132 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	ERVK-11	Q9UQG0	969 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	SLC22A14	Q9Y267	594 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	L3MBTL1	Q9Y468	752 aa		5.12	□□□□□ -1.59
ATXN3-210	ENST00000507965	DNAJC13	O75165	2243 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	PABPN1L	A6NDY0	278 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965		A8MVJ9	347 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	KDM4E	B2RXH2	506 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	ERI3	O43414	337 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	GLS	O94925	669 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	WDR47	O94967	919 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	ZWINT	O95229	277 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	LRAT	O95237	230 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	HOXD4	P09016	255 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CCL3	P10147	92 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CD99	P14209	185 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	ZNF37A	P17032	561 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	KLK2	P20151	261 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	HIST1H2AD	P20671	130 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	ACVR2A	P27037	513 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	AP1S2	P56377	157 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	WNT3	P56703	355 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	RAB38	P57729	211 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	IL2	P60568	153 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	PPIA	P62937	165 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	SKP1	P63208	163 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CCZ1B	P86790	482 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CCZ1	P86791	482 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	GUCY1A3	Q02108	690 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	SLC13A2	Q13183	592 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CSHL1	Q14406	222 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	TERF2	Q15554	542 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CEBPE	Q15744	281 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	ZNF750	Q32MQ0	723 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	FBXO48	Q5FWF7	155 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	ARMC3	Q5W041	872 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	TMEM211	Q6ICI0	200 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	TRMT10B	Q6PF06	316 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CCDC137	Q6PK04	289 aa	Known RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CNTN4	Q8IWV2	1026 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	ZZZ3	Q8IYH5	903 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	TMEM251	Q8N6I4	163 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	RELL2	Q8NC24	303 aa	Predicted RBP	5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	CALML6	Q8TD86	181 aa		5.11	□□□□□ -1.59
ATXN3-210	ENST00000507965	ASB15	Q8WXK1	588 aa		5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms