RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 GRHL1Q9NZI5 618 aa12.65□□□□□ -0.38
DDR1-260ENST00000507533 WIF1Q9Y5W5 379 aa12.65□□□□□ -0.38
DDR1-260ENST00000507533 TP53I11O14683 189 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 WIPF1O43516 503 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 DYRK3O43781 588 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 CD5LO43866 347 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 SNX4O95219 450 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 TTC4O95801 387 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 ACTL6AO96019 429 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 C1GALT1C1LP0DN25 315 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 CPN1P15169 458 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
DDR1-260ENST00000507533 STT3AP46977 705 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 CDKN2DP55273 166 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 IL2P60568 153 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 SLC7A5Q01650 507 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 CAV1Q03135 178 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 VEZF1Q14119 521 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 GLE1Q53GS7 698 aaKnown RBP12.64□□□□□ -0.39
DDR1-260ENST00000507533 FNDC7Q5VTL7 733 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 SLC29A4Q7RTT9 530 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 YRDCQ86U90 279 aaKnown RBP12.64□□□□□ -0.39
DDR1-260ENST00000507533 PACS2Q86VP3 889 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 PPWD1Q96BP3 646 aaKnown RBP12.64□□□□□ -0.39
DDR1-260ENST00000507533 MARK4Q96L34 752 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
DDR1-260ENST00000507533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDR1-260ENST00000507533 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 IQANK1A0A1B0GTG1 560 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 ESPNB1AK53 854 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 E7ESA3 106 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 H0Y3Z8 333 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 MSTNO14793 375 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 CLEC3AO75596 197 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 TNFSF13O75888 250 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 SMNDC1O75940 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
DDR1-260ENST00000507533 TBX6O95947 436 aaPredicted RBP12.63□□□□□ -0.39
DDR1-260ENST00000507533 ENO2P09104 434 aaPredicted RBP12.63□□□□□ -0.39
DDR1-260ENST00000507533 GSTM2P28161 218 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 HPDP32754 393 aaPredicted RBP12.63□□□□□ -0.39
DDR1-260ENST00000507533 CD79BP40259 229 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 ELK3P41970 407 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 PLTPP55058 493 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 SRYQ05066 204 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 PDIA2Q13087 525 aaKnown RBP12.63□□□□□ -0.39
DDR1-260ENST00000507533 SLBPQ14493 270 aaKnown RBP eCLIP12.63□□□□□ -0.39
DDR1-260ENST00000507533 TRADDQ15628 312 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 KRTAP24-1Q3LI83 254 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 ADPRMQ3LIE5 342 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 HSP90AA5PQ58FG0 334 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 SPANXN3Q5MJ09 141 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 TMEM64Q6YI46 380 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 DGAT2L6Q6ZPD8 337 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 ADGRE4PQ86SQ3 457 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 IGDCC3Q8IVU1 814 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 OR4N5Q8IXE1 308 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 C7orf57Q8NEG2 295 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 DOK4Q8TEW6 326 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 UCN3Q969E3 161 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 RBM18Q96H35 190 aaKnown RBP12.63□□□□□ -0.39
DDR1-260ENST00000507533 ZC3HAV1LQ96H79 300 aaKnown RBP12.63□□□□□ -0.39
DDR1-260ENST00000507533 FBXL20Q96IG2 436 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 ART5Q96L15 291 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 UCN2Q96RP3 112 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 MAPKAP1Q9BPZ7 522 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 ANGPTL4Q9BY76 406 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 WWTR1Q9GZV5 400 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 LYRM4Q9HD34 91 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 PRDM7Q9NQW5 492 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 IARS2Q9NSE4 1012 aaKnown RBP12.63□□□□□ -0.39
DDR1-260ENST00000507533 RYDENQ9NUL5 291 aaKnown RBP12.63□□□□□ -0.39
DDR1-260ENST00000507533 TEX264Q9Y6I9 313 aa12.63□□□□□ -0.39
DDR1-260ENST00000507533 A0A1W2PNV4 684 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 ANKDD1BA6NHY2 528 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 CAPN14A8MX76 684 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 EIF3HO15372 352 aaKnown RBP eCLIP12.62□□□□□ -0.395e-6■■■□□ 14.9
DDR1-260ENST00000507533 FGF17O60258 216 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 GNAZP19086 355 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 GCKP35557 465 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 PCYT1AP49585 367 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 FBXW4P57775 412 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 GUCY2DQ02846 1103 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 TGM3Q08188 693 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 CRYMQ14894 314 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 RPS6KA2Q15349 733 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 HP1BP3Q5SSJ5 553 aaPredicted RBP12.62□□□□□ -0.39
DDR1-260ENST00000507533 RBM20Q5T481 1227 aaKnown RBP12.62□□□□□ -0.39
DDR1-260ENST00000507533 ZDHHC24Q6UX98 284 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 SLCO4C1Q6ZQN7 724 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 ZNF550Q7Z398 422 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 VN1R5Q7Z5H4 357 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 TAGAPQ8N103 731 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 KRT78Q8N1N4 520 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 FAM83FQ8NEG4 500 aaPredicted RBP12.62□□□□□ -0.39
DDR1-260ENST00000507533 SPPL2AQ8TCT8 520 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 F2RL3Q96RI0 385 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 FAM167BQ9BTA0 163 aa12.62□□□□□ -0.39
DDR1-260ENST00000507533 L2HGDHQ9H9P8 463 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms