RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 C3P1Q6ZMU1 363 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 MEX3BQ6ZN04 569 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 CLYBLQ8N0X4 340 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 PLD6Q8N2A8 252 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 METTL4Q8N3J2 472 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 RNF175Q8N4F7 328 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 OR52B6Q8NGF0 335 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 IFT81Q8WYA0 676 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 DTNBP1Q96EV8 351 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 FAIM2Q9BWQ8 316 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 EXO5Q9H790 373 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 TUBA8Q9NY65 449 aaPredicted RBP13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 ACAD8Q9UKU7 415 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 RNF6Q9Y252 685 aa13.3□□□□□ -0.28
HMGCS1-203ENST00000507004 ATP6AP2A0A1C7CYW4 349 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 POC1B-GALNT4F8VUJ3 575 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 ATP6AP2O75787 350 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 NAGAP17050 411 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 DEKP35659 375 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 KIR3DL1P43629 444 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 NEK2P51955 445 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 MAPK12P53778 367 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 PSPHP78330 225 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 TRAF3Q13114 568 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 RPS6KA2Q15349 733 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 EMC4Q5J8M3 183 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 LYPD8Q6UX82 237 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 TIFABQ6ZNK6 161 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 TRMT10CQ7L0Y3 403 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 SAMD14Q8IZD0 417 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 LRRC25Q8N386 305 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 LIX1Q8N485 282 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 FAM13CQ8NE31 585 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 SELENOMQ8WWX9 145 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF597Q96LX8 424 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 DOHHQ9BU89 302 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 SHCBP1LQ9BZQ2 653 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF703Q9H7S9 590 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 MCCC2Q9HCC0 563 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 TRPS1Q9UHF7 1281 aa13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 DMGDHQ9UI17 866 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 PHF3Q92576 2039 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-203ENST00000507004 A0A0G2JMM0 328 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 EXOC1LA0A1B0GW35 172 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 A0A1W2PPB8 328 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 A0A1W2PRS3 328 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 CCDC151A5D8V7 595 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 LRRC14BA6NHZ5 514 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 KIR3DP1A8MWS1 328 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 TRIM49D1C9J1S8 452 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 G3V3Y1 287 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 C19orf84I3L1E1 186 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF354AO60765 605 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 KRT6AP02538 564 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 KRT6BP04259 564 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 KLK1P06870 262 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 CPMP14384 443 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 PORP16435 677 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 KRT15P19012 456 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 ZFP36L2P47974 494 aaKnown RBP13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 KRT6CP48668 564 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 XKP51811 444 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 NUP107P57740 925 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 NAA20P61599 178 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 PMPCAQ10713 525 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 CDSNQ15517 529 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF585AQ6P3V2 769 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 IFT20Q8IY31 132 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF295-AS1Q8N0V1 137 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 MARVELD2Q8N4S9 558 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 CEP112Q8N8E3 955 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF441Q8N8Z8 693 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 OR4F6Q8NGB9 312 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF483Q8TF39 744 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 DCAKDQ8WVC6 231 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 LRRC46Q96FV0 321 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 CDK15Q96Q40 435 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 TTYH2Q9BSA4 534 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 OR10A5Q9H207 317 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 ZBTB26Q9HCK0 441 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 SEMA4BQ9NPR2 832 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 PNPLA3Q9NST1 481 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 FETUBQ9UGM5 382 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 PCDHA9Q9Y5H5 950 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 NPFFR2Q9Y5X5 522 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 CHCHD2Q9Y6H1 151 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 CELSR2Q9HCU4 2923 aa13.28□□□□□ -0.28
HMGCS1-203ENST00000507004 GLOD5A6NK44 160 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 H3BQF6 201 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNHIT1O43257 154 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 BCAS2O75934 225 aaPredicted RBP13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 IGFBP2P18065 325 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 CSNK2A2P19784 350 aaPredicted RBP13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 NT5EP21589 574 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 GCKP35557 465 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 PIGAP37287 484 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 GSTM5P46439 218 aa13.27□□□□□ -0.29
HMGCS1-203ENST00000507004 NR0B1P51843 470 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms