RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TNRC6AQ8NDV7 1962 aaKnown RBP7.9□□□□□ -1.15
PDGFC-205ENST00000506880 A0A0G2JN53 185 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 PRSS51A0A1B0GVH4 220 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 C17orf105B2RV13 164 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 TMEM233B4DJY2 109 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 E9PBE3 544 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 AGRPO00253 132 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 PDPK1O15530 556 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 PEX11AO75192 247 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 SKAP2O75563 359 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 NPPAP01160 153 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 WT1P19544 449 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 ENDOUP21128 410 aaKnown RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 MAOAP21397 527 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 CASRP41180 1078 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 KIR3DL1P43629 444 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 PSMD4P55036 377 aaKnown RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 POLE2P56282 527 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 NRG3P56975 720 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 OLR1P78380 273 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 BTG2P78543 158 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 KCNAB2Q13303 367 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 PRICKLE4Q2TBC4 344 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 DEFB109BQ30KR1 87 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 BTBD16Q32M84 506 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 GALNTL6Q49A17 601 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 LACTB2Q53H82 288 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 COQ5Q5HYK3 327 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 ABHD17BQ5VST6 288 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 AP1ARQ63HQ0 302 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 C18orf63Q68DL7 685 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 OPN5Q6U736 354 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 RNF111Q6ZNA4 994 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 TAGAPQ8N103 731 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 MIER2Q8N344 545 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 LIX1Q8N485 282 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 GOLM1Q8NBJ4 401 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 GOT1L1Q8NHS2 421 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 C9orf43Q8TAL5 461 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 SLC22A8Q8TCC7 542 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 SLC2A12Q8TD20 617 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 PTPMT1Q8WUK0 201 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 HOXB13Q92826 284 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 CNRIP1Q96F85 164 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 SENP5Q96HI0 755 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 C3orf30Q96M34 536 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 ZNF317Q96PQ6 595 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 HBEGFQ99075 208 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 DEFB126Q9BYW3 111 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 SLC25A18Q9H1K4 315 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 CLMPQ9H6B4 373 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 RMND5AQ9H871 391 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 CPNE5Q9HCH3 593 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 PNPOQ9NVS9 261 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 FAM53CQ9NYF3 392 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 BTNL2Q9UIR0 455 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 ANAPC2Q9UJX6 822 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 MRTO4Q9UKD2 239 aaKnown RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 PCDHGB4Q9UN71 923 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 C19orf53Q9UNZ5 99 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 FIS1Q9Y3D6 152 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 GPR45Q9Y5Y3 372 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 MRPS18BQ9Y676 258 aaKnown RBP7.89□□□□□ -1.15
PDGFC-205ENST00000506880 ATMQ13315 3056 aa7.89□□□□□ -1.15
PDGFC-205ENST00000506880 CHD6Q8TD26 2715 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 DUXAA6NLW8 204 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 GABRR3A8MPY1 467 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 TCP11X1B4DZS4 312 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 FAM227AF5H4B4 570 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ANKRD28O15084 1053 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 PGRMC2O15173 223 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 TO15178 435 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 CCDC22O60826 627 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 LDB3O75112 727 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 JRKO75564 520 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 SLC22A3O75751 556 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 CDC123O75794 336 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 PSMG1O95456 288 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 DDAH2O95865 285 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 AK1P00568 194 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 STATHP02808 62 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ZCCHC18P0CG32 403 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 PRKAR1AP10644 381 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 G6PDP11413 515 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 TNNI3P19429 210 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 DRD5P21918 477 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 PPIBP23284 216 aaKnown RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ITGA3P26006 1051 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 MANFP55145 182 aaKnown RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 SLC37A1P57057 533 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 SQLEQ14534 574 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 MAPRE2Q15555 327 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ZNHIT3Q15649 155 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 COL28A1Q2UY09 1125 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 TBCELQ5QJ74 424 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 ATG14Q6ZNE5 492 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 RPS19BP1Q86WX3 136 aaKnown RBP7.88□□□□□ -1.15
PDGFC-205ENST00000506880 TICAM1Q8IUC6 712 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 OR2L13Q8N349 312 aa7.88□□□□□ -1.15
PDGFC-205ENST00000506880 RNF175Q8N4F7 328 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms