RNA–Protein interactions for RNA: ENST00000506873.5

KLHL3-208, Transcript of kelch like family member 3, human

TSL 2

Gene KLHL3, Length 1,883 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHL3-208	ENST00000506873	DPH2	Q9BQC3	489 aa	Predicted RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	TGIF2	Q9GZN2	237 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	IFT80	Q9P2H3	777 aa	Predicted RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	MKL2	Q9ULH7	1088 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	USP22	Q9UPT9	525 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	IGLV3-12	A0A075B6K2	115 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	EVPLL	A8MZ36	301 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	C9orf172	C9J069	976 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	KCNK5	O95279	499 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	RECK	O95980	971 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	ATP1B1	P05026	303 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	KLK3	P07288	261 aa	Predicted RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	ZGLP1	P0C6A0	271 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	PPP2R1B	P30154	601 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	MVD	P53602	400 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	MS4A2	Q01362	244 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	OCA2	Q04671	838 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	TRMT12	Q53H54	448 aa	Known RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	SAMD4B	Q5PRF9	694 aa	Known RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	WLS	Q5T9L3	541 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	ANGPTL8	Q6UXH0	198 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	TMPRSS12	Q86WS5	348 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	ARHGAP24	Q8N264	748 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	GALNT6	Q8NCL4	622 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	ZFP28	Q8NHY6	868 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	FAM120B	Q96EK7	910 aa	Known RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	MYCBP	Q99417	103 aa	Predicted RBP	13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	PCDHAC1	Q9H158	963 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	FER1L5	A0AVI2	2057 aa		13.78	□□□□□ -0.2
KLHL3-208	ENST00000506873	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	CNOT3	O75175	753 aa	Known RBP	13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	NME6	O75414	186 aa	Predicted RBP	13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	STK17B	O94768	372 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	GPX2	P18283	190 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	ME2	P23368	584 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	CHI3L1	P36222	383 aa	Predicted RBP	13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	MC3R	P41968	323 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	GSK3B	P49841	420 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	PRKAG1	P54619	331 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	IGLV3-21	P80748	117 aa	Predicted RBP	13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	RHAG	Q02094	409 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	MGAT2	Q10469	447 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	NKG7	Q16617	165 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	SPDYE7P	Q495Y7	208 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	COX20	Q5RI15	118 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	FAM111B	Q6SJ93	734 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	C6orf120	Q7Z4R8	191 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	ARPIN	Q7Z6K5	226 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	FAM13C	Q8NE31	585 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	OR7G2	Q8NG99	324 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	TSLP	Q969D9	159 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	LRFN5	Q96NI6	719 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	ZPBP	Q9BS86	351 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	SPRY4	Q9C004	299 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	VN1R1	Q9GZP7	353 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	CHST8	Q9H2A9	424 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	ALG2	Q9H553	416 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	EPS8L2	Q9H6S3	715 aa		13.77	□□□□□ -0.21
KLHL3-208	ENST00000506873	RNF103-CHMP3	A0A140T963	221 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	UPK1A	O00322	258 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	CT62	P0C5K7	136 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	AGXT	P21549	392 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	NT5E	P21589	574 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	TP53BP2	Q13625	1128 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	RGN	Q15493	299 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	NSDHL	Q15738	373 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	PRICKLE4	Q2TBC4	344 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	TMEM164	Q5U3C3	297 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	CPZ	Q66K79	652 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	TIPARP	Q7Z3E1	657 aa	Known RBP	13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	SZRD1	Q7Z422	152 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	RNF130	Q86XS8	419 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	WDR60	Q8WVS4	1066 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	MR1	Q95460	341 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	DDA1	Q9BW61	102 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	SEMA3G	Q9NS98	782 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	DLL3	Q9NYJ7	618 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	FOXJ2	Q9P0K8	574 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	CDV3	Q9UKY7	258 aa	Known RBP	13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	POMP	Q9Y244	141 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	PCDHGA3	Q9Y5H0	932 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	GMEB1	Q9Y692	573 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	LAMA5	O15230	3695 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	ZFHX4	Q86UP3	3567 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	SPTBN4	Q9H254	2564 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	IGKV3D-11	A0A0A0MRZ8	115 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873		A8MUI8	341 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873		H0YHG0	523 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	OR10H2	O60403	315 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	TNFSF15	O95150	251 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	NUDT7	P0C024	238 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	CRAT	P43155	626 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	GZMM	P51124	257 aa		13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	EEFSEC	P57772	596 aa	Known RBP	13.76	□□□□□ -0.21
KLHL3-208	ENST00000506873	RPS26	P62854	115 aa	Known RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms