RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 UBE2Q1Q7Z7E8 422 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 TCEANCQ8N8B7 351 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 HUS1BQ8NHY5 278 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 FBXO32Q969P5 355 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 ERMAPQ96PL5 475 aaPredicted RBP15.1■□□□□ 0.01
SCLT1-208ENST00000506368 C7orf50Q9BRJ6 194 aaKnown RBP15.1■□□□□ 0.01
SCLT1-208ENST00000506368 SLC35A5Q9BS91 424 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 BOCQ9BWV1 1114 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 ACTR6Q9GZN1 396 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 C11orf49Q9H6J7 331 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 RC3H2Q9HBD1 1191 aaKnown RBP15.1■□□□□ 0.01
SCLT1-208ENST00000506368 ACSL5Q9ULC5 683 aa15.1■□□□□ 0.01
SCLT1-208ENST00000506368 GLYATL1P3A0A0U1RQE8 302 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 H3BN98 237 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 TSPAN4O14817 238 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 ACSL4O60488 711 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 RHOCP08134 193 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 ETFAP13804 333 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 F8A1P23610 371 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 RBMS1P29558 406 aaKnown RBP15.09■□□□□ 0.01
SCLT1-208ENST00000506368 RPA4Q13156 261 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 NFE2L1Q14494 772 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 POU4F3Q15319 338 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 TMEM44Q2T9K0 475 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 FLYWCH1Q4VC44 716 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 FAM151BQ6UXP7 276 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 UNC5DQ6UXZ4 953 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 ZNF783Q6ZMS7 281 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 TIGD4Q8IY51 512 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 ARHGAP9Q9BRR9 750 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 WACQ9BTA9 647 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 HDHD2Q9H0R4 259 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 TMEM168Q9H0V1 697 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 POLR2J3Q9H1A7 115 aaKnown RBP15.09■□□□□ 0.01
SCLT1-208ENST00000506368 OR51J1Q9H342 316 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 EVA1BQ9NVM1 165 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 ASB6Q9NWX5 421 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 ATPIF1Q9UII2 106 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 CACNG2Q9Y698 323 aa15.09■□□□□ 0.01
SCLT1-208ENST00000506368 MEIKINA0A087WXM9 373 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 CARNS1A5YM72 827 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 GAPDHSO14556 408 aaPredicted RBP15.08■□□□□ 0.01
SCLT1-208ENST00000506368 SLC28A2O43868 658 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 PSIP1O75475 530 aaKnown RBP15.08■□□□□ 0.01
SCLT1-208ENST00000506368 LALBAP00709 142 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 ANXA4P09525 319 aaPredicted RBP15.08■□□□□ 0.01
SCLT1-208ENST00000506368 ETV5P41161 510 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 RFX3P48380 749 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 SLC11A2P49281 568 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 AFF1P51825 1210 aaKnown RBP15.08■□□□□ 0.01
SCLT1-208ENST00000506368 MRPS6P82932 125 aaKnown RBP15.08■□□□□ 0.01
SCLT1-208ENST00000506368 IRF8Q02556 426 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 FGFBP1Q14512 234 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 GANABQ14697 944 aaKnown RBP15.08■□□□□ 0.01
SCLT1-208ENST00000506368 ARMC12Q5T9G4 340 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 ANGPTL8Q6UXH0 198 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 SLC39A5Q6ZMH5 540 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 MBOAT1Q6ZNC8 495 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 USP45Q70EL2 814 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 GET4Q7L5D6 327 aaPredicted RBP15.08■□□□□ 0.01
SCLT1-208ENST00000506368 OR11H7Q8NGC8 314 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 TMEM203Q969S6 136 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 SMIM14Q96QK8 99 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 SLC6A15Q9H2J7 730 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 ZFYVE1Q9HBF4 777 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 SEMA3GQ9NS98 782 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 GPATCH2Q9NW75 528 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 ST3GAL5Q9UNP4 418 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 TRPV2Q9Y5S1 764 aa15.08■□□□□ 0.01
SCLT1-208ENST00000506368 A0A1W2PPL8 197 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 hCG_1807616A0A1W2PRN6 198 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 AGAP14A8MT82 685 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 PRODHO43272 600 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 PQBP1O60828 265 aaKnown RBP15.08■□□□□ 0
SCLT1-208ENST00000506368 PPM1BO75688 479 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 UGT2B7P16662 529 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 HOXC8P31273 242 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 AP1S1P61966 158 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 FABP5Q01469 135 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 SYT14P1Q58G82 188 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 XKR6Q5GH73 641 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 GRHL2Q6ISB3 625 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 TMEM81Q6P7N7 255 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 CEACAM20Q6UY09 585 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 OVCH2Q7RTZ1 564 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 NXPE1Q8N323 547 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 ANKRD53Q8N9V6 530 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 UXS1Q8NBZ7 420 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 OR5M3Q8NGP4 307 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 ADAMTS19Q8TE59 1207 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 SMG7Q92540 1137 aaKnown RBP15.08■□□□□ 0
SCLT1-208ENST00000506368 DPYSL5Q9BPU6 564 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 NLNQ9BYT8 704 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 ABCG5Q9H222 651 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 REEP4Q9H6H4 257 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 RDH8Q9NYR8 311 aa15.08■□□□□ 0
SCLT1-208ENST00000506368 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.07■□□□□ 0
SCLT1-208ENST00000506368 CIB4A0PJX0 185 aa15.07■□□□□ 0
SCLT1-208ENST00000506368 H3BNC9 293 aa15.07■□□□□ 0
SCLT1-208ENST00000506368 AKAP8O43823 692 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms