RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ROGDIQ9GZN7 287 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 UBQLN3Q9H347 655 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 LZTFL1Q9NQ48 299 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 DNAJC11Q9NVH1 559 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 JKAMPQ9P055 326 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 CTNNAL1Q9UBT7 734 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 PACSIN3Q9UKS6 424 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TESMINQ9Y4I5 508 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 WIF1Q9Y5W5 379 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 NPFFR2Q9Y5X5 522 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 ARID1AO14497 2285 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 DOCK7Q96N67 2140 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 NSD1Q96L73 2696 aaPredicted RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 C2orf92A0A1B0GVN3 265 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 FAM95CA0A1B0GW59 222 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 GLOD5A6NK44 160 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 DEFB108AA8MXU0 73 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CTIFO43310 598 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CCNT2O60583 730 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PRAMEF4O60810 478 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CRLF1O75462 422 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 SNX4O95219 450 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 TTC4O95801 387 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 HPNP05981 417 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 C8BP07358 591 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 ALOX15P16050 662 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 KRT15P19012 456 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 FPR1P21462 350 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 HIST1H1TP22492 207 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 SSTR4P31391 388 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 SLC6A12P48065 614 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PTH2RP49190 550 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 RAP1GDS1P52306 607 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 NAGLUP54802 743 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 DIO3P55073 304 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 TAS2R39P59534 338 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CDKL1Q00532 357 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 IRF8Q02556 426 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 DMTNQ08495 405 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 FAM27E3Q08E93 113 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 SLAMF1Q13291 335 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PDK4Q16654 411 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PAGE2BQ5JRK9 111 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 TEDDM1Q5T9Z0 273 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 FNDC7Q5VTL7 733 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PRAMEF9Q5VWM5 478 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 HLA-DQA1Q5Y7H0 255 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 C18orf63Q68DL7 685 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 HMBOX1Q6NT76 420 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CCDC137Q6PK04 289 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PRSS57Q6UWY2 283 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF550Q7Z398 422 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 GRAMD2AQ8IUY3 354 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CNTN4Q8IWV2 1026 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PPIL6Q8IXY8 311 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 TAGAPQ8N103 731 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 RNF175Q8N4F7 328 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 SPATA6LQ8N4H0 392 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 NKAPQ8N5F7 415 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CNEP1R1Q8N9A8 125 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 BBOF1Q8ND07 529 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 MAPK1IP1LQ8NDC0 245 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 SRFBP1Q8NEF9 429 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 FAM83FQ8NEG4 500 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 OR14L1PQ8NHC6 308 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PPP1R14CQ8TAE6 165 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 ANKRD49Q8WVL7 239 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 RIT1Q92963 219 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 PTCD3Q96EY7 689 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 VPS39Q96JC1 886 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 WFIKKN1Q96NZ8 548 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 TM9SF2Q99805 663 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 TBCDQ9BTW9 1192 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 EFCAB11Q9BUY7 163 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 MS4A8Q9BY19 250 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 RPF2Q9H7B2 306 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 NT5DC2Q9H857 520 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 METTL7AQ9H8H3 244 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CALHM2Q9HA72 323 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 SERHLQ9NQF3 203 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF226Q9NYT6 803 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 GPRC5BQ9NZH0 403 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF490Q9ULM2 529 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CORO1CQ9ULV4 474 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 MAPRE3Q9UPY8 281 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CHMP2BQ9UQN3 213 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 MED12Q93074 2177 aa6.28□□□□□ -1.4
NPIPB3-203ENST00000504841 CHD3Q12873 2000 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 A0A1W2PS29 197 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 ANKRD33BA6NCL7 494 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 WASHC1A8K0Z3 465 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 CAPN14A8MX76 684 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 A8MXE2 369 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 TAPBPO15533 448 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 PTPN6P29350 595 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 TLX1P31314 330 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 CASP3P42574 277 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 STARP49675 285 aa6.27□□□□□ -1.41
NPIPB3-203ENST00000504841 TMED10P49755 219 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms