RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 CAPNS1P04632 268 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 CTSBP07858 339 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 FHP07954 510 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 FCGR1AP12314 374 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 CPMP14384 443 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 MATN1P21941 496 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 ALAS2P22557 587 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 SNRPNP63162 240 aaKnown RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 SIM1P81133 766 aaPredicted RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 MRPS22P82650 360 aaKnown RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 FOLH1Q04609 750 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 CHRNB3Q05901 458 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 MAP4K2Q12851 820 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 HSPB3Q12988 150 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 ILKQ13418 452 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 GAB1Q13480 694 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 TP53BP2Q13625 1128 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 SERTAD2Q14140 314 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 GNA13Q14344 377 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 KCNAB1Q14722 419 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 MYBPC3Q14896 1274 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 GPR19Q15760 415 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 SPDYE7PQ495Y7 208 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.53□□□□□ -0.88
DDX41-203ENST00000504781 PTOV1Q86YD1 416 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 OR51Q1Q8NH59 317 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 OR1L3Q8NH93 324 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 FIG4Q92562 907 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 ANKRD9Q96BM1 317 aaPredicted RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 TBC1D20Q96BZ9 403 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 RBM18Q96H35 190 aaKnown RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 ZNF578Q96N58 590 aaPredicted RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 PELOQ9BRX2 385 aaKnown RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 VCX3BQ9H321 246 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 MAGIXQ9H6Y5 334 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 ZNF304Q9HCX3 659 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 C5AR2Q9P296 337 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 GMPR2Q9P2T1 348 aaKnown RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 ANAPC2Q9UJX6 822 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 SAMD4AQ9UPU9 718 aaKnown RBP9.53□□□□□ -0.88
DDX41-203ENST00000504781 ASXL3Q9C0F0 2248 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 COL5A1P20908 1838 aaPredicted RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 EPG5Q9HCE0 2579 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 CHD8Q9HCK8 2581 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 RNF103-CHMP3A0A140T963 221 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 TMEM247A6NEH6 219 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 C1QTNF9BB2RNN3 333 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 CASQ2O14958 399 aaPredicted RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 PEX1O43933 1283 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 RDH16O75452 317 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 PRKRAO75569 313 aaKnown RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 MED26O95402 600 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 C1QTNF9P0C862 333 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 C8orf89P0DMQ9 161 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 RAP2AP10114 183 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 ETFAP13804 333 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 CD59P13987 128 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 NCK1P16333 377 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 ATP6V1B2P21281 511 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 PCGF2P35227 344 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 PTDSS1P48651 473 aaKnown RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 CDK9P50750 372 aaKnown RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 DSTNP60981 165 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 OLR1P78380 273 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 IGLV3-21P80748 117 aaPredicted RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 CDK6Q00534 326 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 EEF1A2Q05639 463 aaKnown RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 CRB2Q5IJ48 1285 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 COX20Q5RI15 118 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 GCNT6Q5T4J0 391 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 AP1ARQ63HQ0 302 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 RHBDD2Q6NTF9 364 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 REEP3Q6NUK4 255 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 FAM180BQ6P0A1 224 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 ANGPTL8Q6UXH0 198 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 CEACAM20Q6UY09 585 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 TTLL10Q6ZVT0 673 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 EIF3MQ7L2H7 374 aaKnown RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 TMPRSS9Q7Z410 1059 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 RNF130Q86XS8 419 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 SLITRK4Q8IW52 837 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 ADGRG5Q8IZF4 528 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 C10orf111Q8N326 155 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 OR2L13Q8N349 312 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 NUP43Q8NFH3 380 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 OR5T3Q8NGG3 340 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 ZNF675Q8TD23 568 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 FAM162AQ96A26 154 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 SLCO4A1Q96BD0 722 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 CTHRC1Q96CG8 243 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 PYURFQ96I23 114 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 RNF145Q96MT1 663 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 CSF3RQ99062 836 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 SCNM1Q9BWG6 230 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 A4GALTQ9NPC4 353 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 FBXO8Q9NRD0 319 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 PRTFDC1Q9NRG1 225 aa9.52□□□□□ -0.89
DDX41-203ENST00000504781 ZCCHC3Q9NUD5 404 aaKnown RBP9.52□□□□□ -0.89
DDX41-203ENST00000504781 ADPRHL2Q9NX46 363 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms