RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 OR51Q1Q8NH59 317 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ZNF675Q8TD23 568 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 TANKQ92844 425 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ELP4Q96EB1 424 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 BBS4Q96RK4 519 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 MUC13Q9H3R2 512 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 PIF1Q9H611 641 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 NECTIN3Q9NQS3 549 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ZNF639Q9UID6 485 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 ENTPD4Q9Y227 616 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 AP3M1Q9Y2T2 418 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 PCDHGA1Q9Y5H4 931 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 SEC16AO15027 2179 aa9.74□□□□□ -0.85
TPM3-217ENST00000504663 CCDC88CQ9P219 2028 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 PCSK5Q92824 1860 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 ELOVL7A1L3X0 281 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 AQP12BA6NM10 295 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 H0YHG0 523 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 UPK1AO00322 258 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 HMGN4O00479 90 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 TM4SF5O14894 197 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 CTNSO60931 367 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 BMP10O95393 424 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 ANP32DO95626 131 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 CBX7O95931 251 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 NTRK1P04629 796 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 FBXO45P0C2W1 286 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 PORP16435 677 aaPredicted RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 DDX5P17844 614 aaKnown RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 PPIBP23284 216 aaKnown RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 PCGF2P35227 344 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 MAP3K8P41279 467 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 XCR1P46094 333 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 ARSFP54793 590 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 CASP9P55211 416 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 PCBP3P57721 371 aaKnown RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 MRPS35P82673 323 aaKnown RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 TAGLNQ01995 201 aaKnown RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 FADDQ13158 208 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 VMACQ2NL98 169 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.73□□□□□ -0.85
TPM3-217ENST00000504663 CYP2R1Q6VVX0 501 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 RBM44Q6ZP01 1051 aaKnown RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 ASCL5Q7RTU5 278 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 C6orf120Q7Z4R8 191 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 SLCO6A1Q86UG4 719 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 IFNEQ86WN2 208 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 AQP12AQ8IXF9 295 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 OR2L13Q8N349 312 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 FAM86B1Q8N7N1 296 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 ADCY4Q8NFM4 1077 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 ZFP28Q8NHY6 868 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 MIPOL1Q8TD10 442 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 JADE3Q92613 823 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 HOXB13Q92826 284 aaPredicted RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 KAT2AQ92830 837 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 TSLPQ969D9 159 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 MAL2Q969L2 176 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 OR1F2PQ96R84 312 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 CDC6Q99741 560 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 CTRCQ99895 268 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 SH3GL1Q99961 368 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 ECSITQ9BQ95 431 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 THUMPD3Q9BV44 507 aaKnown RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 GORASP2Q9H8Y8 452 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 AKIRIN1Q9H9L7 192 aaPredicted RBP9.73□□□□□ -0.85
TPM3-217ENST00000504663 RNPEPL1Q9HAU8 725 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 FANCEQ9HB96 536 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 S100A14Q9HCY8 104 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 FBXO8Q9NRD0 319 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 PRTFDC1Q9NRG1 225 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 IRAK4Q9NWZ3 460 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 CTSFQ9UBX1 484 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 RAPGEFL1Q9UHV5 662 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 MAGEL2Q9UJ55 1249 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 SERTAD3Q9UJW9 196 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 RARRES3Q9UL19 164 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 SRPK3Q9UPE1 567 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 MAP4K5Q9Y4K4 846 aa9.73□□□□□ -0.85
TPM3-217ENST00000504663 DMXL1Q9Y485 3027 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 PTPRBP23467 1997 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 BLACEA4D250 179 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 VSTM2BA6NLU5 285 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 B4E171 279 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 HRKO00198 91 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 CXCR6O00574 342 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 NVLO15381 856 aaKnown RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 PLOD3O60568 738 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 SCRG1O75711 98 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 CDC123O75794 336 aaPredicted RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 ZIC2O95409 532 aaPredicted RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 SEMG1P04279 462 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 SLC35E2P0CK97 266 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 ITIH1P19827 911 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 MAOAP21397 527 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 FBLP22087 321 aaKnown RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 TLX1P31314 330 aaPredicted RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 TSPAN7P41732 249 aa9.72□□□□□ -0.85
TPM3-217ENST00000504663 CCT3P49368 545 aaKnown RBP9.72□□□□□ -0.85
TPM3-217ENST00000504663 LIMK1P53667 647 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms