RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 LINGO1Q96FE5 620 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 C1orf159Q96HA4 380 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 DACH2Q96NX9 599 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 SORCS2Q96PQ0 1159 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 OR4K3Q96R72 315 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 TIMP4Q99727 224 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 PIP5K1AQ99755 562 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 REG4Q9BYZ8 158 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 AMBRA1Q9C0C7 1298 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 PROK2Q9HC23 129 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 ABHD10Q9NUJ1 306 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 TMEM184CQ9NVA4 438 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 EHD3Q9NZN3 535 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 HEY2Q9UBP5 337 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 LCMT1Q9UIC8 334 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 MAPRE3Q9UPY8 281 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 PDE10AQ9Y233 779 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 MED16Q9Y2X0 877 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 MRFAP1Q9Y605 127 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 SLC22A7Q9Y694 548 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 DOCK7Q96N67 2140 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 IGHV4-30-2A0A087WSY4 118 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 A0A1W2PNV4 684 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 A0A1W2PS29 197 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TCRBV7S3A2A0A539 114 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TRBC2A0A5B9 178 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 CTAGE9A4FU28 777 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 NPEPPSL1A6NEC2 478 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SLC22A31A6NKX4 558 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SMTNL1A8MU46 457 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 A8MV72 311 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 SAP18O00422 153 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 RTCAO00442 366 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 CLOCKO15516 846 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 CD5LO43866 347 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 MFAP3LO75121 409 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 FBXO24O75426 580 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SIX3O95343 332 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 EPPINO95925 133 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TGM6O95932 706 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SOD3P08294 240 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 FAM157CP0CG43 387 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 CYP4B1P13584 511 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TNNI3P19429 210 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TNFRSF1AP19438 455 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 FPR1P21462 350 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 CRYGSP22914 178 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 ADRA1DP25100 572 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PSMA3P25788 255 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 CNTFP26441 200 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 OPRM1P35372 400 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PPARGP37231 505 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 SKIV2L2P42285 1042 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 MSH2P43246 934 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 KCNJ5P48544 419 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 STARP49675 285 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 CCR8P51685 355 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 NAGLUP54802 743 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 NAP1L1P55209 391 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 CASP9P55211 416 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 RAB38P57729 211 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 HERVK_113P63132 956 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 ERVK-8P63133 956 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 RNF4P78317 190 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SRSF3P84103 164 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 RCAN2Q14206 197 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 RPS6KA1Q15418 735 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 TSC22D1Q15714 1073 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 ELAVL1Q15717 326 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 TTLL9Q3SXZ7 439 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 RBM20Q5T481 1227 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 CASC4Q6P4E1 433 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 OPN5Q6U736 354 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 LCTLQ6UWM7 567 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PRSS57Q6UWY2 283 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 ANGPTL8Q6UXH0 198 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PLEKHM3Q6ZWE6 761 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 P4HA3Q7Z4N8 544 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PCGF5Q86SE9 256 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 LINC00523Q86TU6 105 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 LRRC6Q86X45 466 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 HIPK1Q86Z02 1210 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 GPALPP1Q8IXQ4 340 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 UBQLNLQ8IYU4 475 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 LRRC25Q8N386 305 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 RNF175Q8N4F7 328 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 GOLM1Q8NBJ4 401 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 FAM83FQ8NEG4 500 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 GABPB2Q8TAK5 448 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 RAB3IL1Q8TBN0 382 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 NT5CQ8TCD5 201 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PTPMT1Q8WUK0 201 aaPredicted RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 C1orf54Q8WWF1 131 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 SLC5A11Q8WWX8 675 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 AKAP1Q92667 903 aaKnown RBP eCLIP3.29□□□□□ -1.88
USP46-205ENST00000504078 DIO2Q92813 273 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 PPWD1Q96BP3 646 aaKnown RBP3.29□□□□□ -1.88
USP46-205ENST00000504078 WDYHV1Q96HA8 205 aa3.29□□□□□ -1.88
USP46-205ENST00000504078 CCDC42Q96M95 316 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms