RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PMPCAQ10713 525 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 HYAL4Q2M3T9 481 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 C6orf163Q5TEZ5 329 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 ACAD11Q709F0 780 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 LCA5Q86VQ0 697 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 METTL4Q8N3J2 472 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 FAM109AQ8N4B1 249 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 TMEM151AQ8N4L1 468 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 FAM13CQ8NE31 585 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 LILRB4Q8NHJ6 448 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 ASB5Q8WWX0 329 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 SELENOMQ8WWX9 145 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 UCN3Q969E3 161 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 TP53INP1Q96A56 240 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 SPACA9Q96E40 222 aaPredicted RBP11.03□□□□□ -0.64
MED28-203ENST00000503945 GAL3ST4Q96RP7 486 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 MRPL1Q9BYD6 325 aaKnown RBP11.03□□□□□ -0.64
MED28-203ENST00000503945 CXorf21Q9HAI6 301 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 ALKBH4Q9NXW9 302 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 SLC12A4Q9UP95 1085 aa11.03□□□□□ -0.64
MED28-203ENST00000503945 SETD2Q9BYW2 2564 aaPredicted RBP11.02□□□□□ -0.65
MED28-203ENST00000503945 A0A1B0GVC2 190 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 PPP6CO00743 305 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 BCKDKO14874 412 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 ULK1O75385 1050 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 SUPT7LO94864 414 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 PDYNP01213 254 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 KRT6AP02538 564 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 KRT6BP04259 564 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 FBXO45P0C2W1 286 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 PORP16435 677 aaPredicted RBP11.02□□□□□ -0.65
MED28-203ENST00000503945 SSTR2P30874 369 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 KRT6CP48668 564 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 MAN2A2P49641 1150 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 NRG3P56975 720 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 CLCQ05315 142 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 FOXO1Q12778 655 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 TRAF3Q13114 568 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 TESK1Q15569 626 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 GGTA1PQ4G0N0 100 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 TMEM198Q66K66 360 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 ZNF585AQ6P3V2 769 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 TMEM251Q8N6I4 163 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 OR7G1Q8NGA0 311 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 OR5M3Q8NGP4 307 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 OR10Q1Q8NGQ4 319 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 PAQR8Q8TEZ7 354 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 SARAFQ96BY9 339 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 JSRP1Q96MG2 331 aaPredicted RBP11.02□□□□□ -0.65
MED28-203ENST00000503945 SMC6Q96SB8 1091 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 SPOCK3Q9BQ16 436 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 C1QTNF3Q9BXJ4 246 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 WWTR1Q9GZV5 400 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 OR10A5Q9H207 317 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 BRF2Q9HAW0 419 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 ZFP64Q9NPA5 681 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 KCNJ16Q9NPI9 418 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 TUBA8Q9NY65 449 aaPredicted RBP11.02□□□□□ -0.65
MED28-203ENST00000503945 VPS29Q9UBQ0 182 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 DCDC2Q9UHG0 476 aa11.02□□□□□ -0.65
MED28-203ENST00000503945 BOKQ9UMX3 212 aaPredicted RBP11.02□□□□□ -0.65
MED28-203ENST00000503945 A0A0G2JMM0 328 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 A0A1W2PPB8 328 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 A0A1W2PRS3 328 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 C1orf226A1L170 272 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 GOLGA6L10A6NI86 522 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 KIR3DP1A8MWS1 328 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 HCN1O60741 890 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 IGHG3P01860 377 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 ABHD2P08910 425 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 HOXD4P09016 255 aaPredicted RBP11.01□□□□□ -0.65
MED28-203ENST00000503945 CPMP14384 443 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 TSPAN8P19075 237 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 CSNK2A2P19784 350 aaPredicted RBP11.01□□□□□ -0.65
MED28-203ENST00000503945 IMPDH1P20839 514 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 NT5EP21589 574 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 ACVR2AP27037 513 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 NR0B1P51843 470 aaKnown RBP11.01□□□□□ -0.65
MED28-203ENST00000503945 FUT7Q11130 342 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 EMC4Q5J8M3 183 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 TBCELQ5QJ74 424 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 WLSQ5T9L3 541 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 LYPD8Q6UX82 237 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 RPS27LQ71UM5 84 aaKnown RBP11.01□□□□□ -0.65
MED28-203ENST00000503945 TRILQ7L0X0 811 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 PACS2Q86VP3 889 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 SLC22A9Q8IVM8 553 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 GALNT12Q8IXK2 581 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 OR5M9Q8NGP3 310 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 METTL6Q8TCB7 284 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 ZNF483Q8TF39 744 aaPredicted RBP11.01□□□□□ -0.65
MED28-203ENST00000503945 DIO2Q92813 273 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 TM4SF18Q96CE8 201 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 FAIM2Q9BWQ8 316 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 SH2D2AQ9NP31 389 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 FARSBQ9NSD9 589 aaKnown RBP11.01□□□□□ -0.65
MED28-203ENST00000503945 TEX10Q9NXF1 929 aaPredicted RBP11.01□□□□□ -0.65
MED28-203ENST00000503945 TMEM216Q9P0N5 145 aa11.01□□□□□ -0.65
MED28-203ENST00000503945 CFL2Q9Y281 166 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms