RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 PCDHB18PQ96TA0 734 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 TMEM204Q9BSN7 226 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 WWP1Q9H0M0 922 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 ATP13A3Q9H7F0 1226 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 VIPAS39Q9H9C1 493 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 DCAF16Q9NXF7 216 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 VPS54Q9P1Q0 977 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 ZNF624Q9P2J8 865 aaPredicted RBP4.24□□□□□ -1.73
SCLT1-206ENST00000503565 DBF4Q9UBU7 674 aaPredicted RBP4.24□□□□□ -1.73
SCLT1-206ENST00000503565 CHRNA9Q9UGM1 479 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 TOPAZ1Q8N9V7 1692 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 SBNO1A3KN83 1393 aa4.24□□□□□ -1.73
SCLT1-206ENST00000503565 ATRNO75882 1429 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 USP6P35125 1406 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 TNS3Q68CZ2 1445 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CLRN2A0PK11 232 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 DENND3A2RUS2 1198 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 ERICH4A6NGS2 130 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 MYMKA6NI61 221 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 ANHXE9PGG2 379 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 LMO7DNF2Z398 122 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 E2F3O00716 465 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 PDXKO00764 312 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 B4GAT1O43505 415 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CSO75390 466 aaKnown RBP4.23□□□□□ -1.73
SCLT1-206ENST00000503565 SPAG6O75602 509 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 TOM1L1O75674 476 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 ALPLP05186 524 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 TPM3P06753 285 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CALCBP10092 127 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 THRBP10828 461 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 PDHBP11177 359 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 PAICSP22234 425 aaKnown RBP4.23□□□□□ -1.73
SCLT1-206ENST00000503565 OR3A2P47893 321 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 NUMBP49757 651 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 METAP1P53582 386 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 HSPA14Q0VDF9 509 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 SNTB2Q13425 540 aaKnown RBP4.23□□□□□ -1.73
SCLT1-206ENST00000503565 C3AR1Q16581 482 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 USH1GQ495M9 461 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 TMEM41BQ5BJD5 291 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 HIST2H2AA3Q6FI13 130 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CDC42EP5Q6NZY7 148 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 SLC25A47Q6Q0C1 308 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 RBMS3Q6XE24 437 aaKnown RBP4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CACUL1Q86Y37 369 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CCDC185Q8N715 623 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 FADS6Q8N9I5 356 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 POC1AQ8NBT0 407 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 OR52M1Q8NGK5 317 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 OR2T11Q8NH01 316 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CHPT1Q8WUD6 406 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 SHC3Q92529 594 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CASP10Q92851 521 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 NCLNQ969V3 563 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 PCED1BQ96HM7 432 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 MED30Q96HR3 178 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 LURAP1Q96LR2 239 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 DEFB118Q96PH6 123 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 DUX5Q96PT3 197 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 FICDQ9BVA6 458 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 FAM49AQ9H0Q0 323 aaPredicted RBP4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CXXC4Q9H2H0 198 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 FNDC4Q9H6D8 234 aaPredicted RBP4.23□□□□□ -1.73
SCLT1-206ENST00000503565 CD93Q9NPY3 652 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCLT1-206ENST00000503565 IKBKGQ9Y6K9 419 aa4.23□□□□□ -1.73
SCLT1-206ENST00000503565 BRD4O60885 1362 aaPredicted RBP4.23□□□□□ -1.73
SCLT1-206ENST00000503565 KIF7Q2M1P5 1343 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 TTC21BQ7Z4L5 1316 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 TTC21AQ8NDW8 1320 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 BLMP54132 1417 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 CPSF1Q10570 1443 aaKnown RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 COL22A1Q8NFW1 1626 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 MSGN1A6NI15 193 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 SHISA7A6NL88 538 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 CIDEAO60543 219 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 CSDE1O75534 798 aaKnown RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 SEC24AO95486 1093 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 NADKO95544 446 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 APRTP07741 180 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 HMBSP08397 361 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 HIST1H2AGP0C0S8 130 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 RRASP10301 218 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 SLC2A2P11168 524 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 EPB41P11171 864 aaKnown RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 DRD5P21918 477 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 PSMA5P28066 241 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 FCGR2BP31994 310 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 GBX2P52951 348 aaPredicted RBP4.22□□□□□ -1.73
SCLT1-206ENST00000503565 BACE1P56817 501 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 CHIT1Q13231 466 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 ZSWIM7Q19AV6 140 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 NADK2Q4G0N4 442 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 FGD3Q5JSP0 725 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 NADSYN1Q6IA69 706 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 RTL6Q6ICC9 239 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 RFPL4BQ6ZWI9 263 aa4.22□□□□□ -1.73
SCLT1-206ENST00000503565 ZNF771Q7L3S4 317 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms