RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 DEFB126Q9BYW3 111 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 BRINP2Q9C0B6 783 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 GIMAP4Q9NUV9 329 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 SH3BP4Q9P0V3 963 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 CSAG2Q9Y5P2 127 aa15.35■□□□□ 0.05
SCLT1-205ENST00000503401 NUP214P35658 2090 aaPredicted RBP15.35■□□□□ 0.05
SCLT1-205ENST00000503401 GABRR3A8MPY1 467 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 DYRK3O43781 588 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 IGKV3-11P04433 115 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 ATP1B1P05026 303 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 PRPS2P11908 318 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 MRPS35P82673 323 aaKnown RBP15.34■□□□□ 0.05
SCLT1-205ENST00000503401 SPRED3Q2MJR0 410 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 PRICKLE4Q2TBC4 344 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 H3F3CQ6NXT2 135 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 SIMC1Q8NDZ2 872 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 C7orf57Q8NEG2 295 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 OR7A2PQ8NGA2 310 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 PPCDCQ96CD2 204 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 MARK4Q96L34 752 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 MFRPQ9BY79 579 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 CDCP1Q9H5V8 836 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 ANKRA2Q9H9E1 313 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 SLAMF7Q9NQ25 335 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 PLA2G3Q9NZ20 509 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 COPS7AQ9UBW8 275 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 ZNF451Q9Y4E5 1061 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 COL6A6A6NMZ7 2263 aa15.34■□□□□ 0.05
SCLT1-205ENST00000503401 SCAMP2O15127 329 aaKnown RBP15.33■□□□□ 0.04
SCLT1-205ENST00000503401 CLPSP04118 112 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 SFTPCP11686 197 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 EFNA1P20827 205 aaPredicted RBP15.33■□□□□ 0.04
SCLT1-205ENST00000503401 SOX18P35713 384 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 NCBP2P52298 156 aaKnown RBP eCLIP15.33■□□□□ 0.04
SCLT1-205ENST00000503401 NME5P56597 212 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 MGAT2Q10469 447 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 NFATC3Q12968 1075 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 MFAP5Q13361 173 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 MPEG1Q2M385 716 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 SMU1Q2TAY7 513 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 ACER2Q5QJU3 275 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 TMEM198Q66K66 360 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 EPGNQ6UW88 154 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 HSDL2Q6YN16 418 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 SLC5A8Q8N695 610 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 KAT2AQ92830 837 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 MAELQ96JY0 434 aaKnown RBP15.33■□□□□ 0.04
SCLT1-205ENST00000503401 EBF4Q9BQW3 602 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 ASIC5Q9NY37 505 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 FAM53CQ9NYF3 392 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 TAS2R7Q9NYW3 318 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 STMN3Q9NZ72 180 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 MAT2BQ9NZL9 334 aa15.33■□□□□ 0.04
SCLT1-205ENST00000503401 TMEM200CA6NKL6 621 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 MYO1GB0I1T2 1018 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 EDF1O60869 148 aaKnown RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 PCSK2P16519 638 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 GALNSP34059 522 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 HPCAL1P37235 193 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 AQP5P55064 265 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 PDE7AQ13946 482 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 EXOSC7Q15024 291 aaKnown RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 CEBPEQ15744 281 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 TRMT12Q53H54 448 aaKnown RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 C6orf163Q5TEZ5 329 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 ABHD17BQ5VST6 288 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 OGFOD2Q6N063 350 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 RPS19BP1Q86WX3 136 aaKnown RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 C9orf40Q8IXQ3 194 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 BEST3Q8N1M1 668 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 VWA5B2Q8N398 1253 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 GLIPR2Q9H4G4 154 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 ANKRD10Q9NXR5 420 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 PDPK1O15530 556 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 NME6O75414 186 aaPredicted RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 ZFAND5O76080 213 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 WDPCPO95876 746 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 LAMP1P11279 417 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 S1PR1P21453 382 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 NTSP30990 170 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 MPIP34949 423 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 IDH3AP50213 366 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 SLC37A1P57057 533 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 RNF4P78317 190 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 FUT7Q11130 342 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 MEP1AQ16819 746 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 LSM12Q3MHD2 195 aaKnown RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF628Q5EBL2 1059 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 IGFL2Q6UWQ7 119 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 RNF111Q6ZNA4 994 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF551Q7Z340 670 aaPredicted RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 RIMKLAQ8IXN7 391 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 SAMD14Q8IZD0 417 aaPredicted RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 RBMXL3Q8N7X1 1067 aaKnown RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 LSM14AQ8ND56 463 aaKnown RBP15.32■□□□□ 0.04
SCLT1-205ENST00000503401 ART5Q96L15 291 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 ZNF354BQ96LW1 612 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 AMDHD1Q96NU7 426 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 EPS8L2Q9H6S3 715 aa15.32■□□□□ 0.04
SCLT1-205ENST00000503401 ATP6V1HQ9UI12 483 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms