RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 PPCDCQ96CD2 204 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 CTHRC1Q96CG8 243 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 AGAP4Q96P64 663 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 BRINP2Q9C0B6 783 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 OR8D2Q9GZM6 311 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 AIG1Q9NVV5 245 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 MAT2BQ9NZL9 334 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 MAPRE3Q9UPY8 281 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 CROCCQ5TZA2 2017 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 HRKO00198 91 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ATXN7O15265 892 aaPredicted RBP13.19□□□□□ -0.3
RNF4-202ENST00000502316 CLPSP04118 112 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ALPPP05187 535 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 CT62P0C5K7 136 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 DDX5P17844 614 aaKnown RBP13.19□□□□□ -0.3
RNF4-202ENST00000502316 S1PR1P21453 382 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 NT5EP21589 574 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 LSM12Q3MHD2 195 aaKnown RBP13.19□□□□□ -0.3
RNF4-202ENST00000502316 ZNF628Q5EBL2 1059 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ANKRD26P1Q6NSI1 321 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ACAD11Q709F0 780 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 CCDC116Q8IYX3 515 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 VWA5B2Q8N398 1253 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 SIRT6Q8N6T7 355 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 C9orf43Q8TAL5 461 aaPredicted RBP13.19□□□□□ -0.3
RNF4-202ENST00000502316 COQ8BQ96D53 544 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ERP27Q96DN0 273 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ZNF317Q96PQ6 595 aaPredicted RBP13.19□□□□□ -0.3
RNF4-202ENST00000502316 BBS4Q96RK4 519 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 NPAS2Q99743 824 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 EBF4Q9BQW3 602 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 CCDC28BQ9BUN5 200 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 KCNK13Q9HB14 408 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 SLAMF7Q9NQ25 335 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 TCF7L2Q9NQB0 619 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 FGFR1OP2Q9NVK5 253 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 FAM53CQ9NYF3 392 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 COPS7AQ9UBW8 275 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ZNF639Q9UID6 485 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 ERVK-19Q9WJR5 959 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 GPR45Q9Y5Y3 372 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 CPAMD8Q8IZJ3 1885 aa13.19□□□□□ -0.3
RNF4-202ENST00000502316 TRBV11-1A0A0K0K1C0 115 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 K7EM74 188 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 POLR3GO15318 223 aaPredicted RBP13.18□□□□□ -0.3
RNF4-202ENST00000502316 PDPK1O15530 556 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 SLITRK5O94991 958 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 PDGFAP04085 211 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 IFI6P09912 130 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 IDO1P14902 403 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 NTSP30990 170 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 MRPL19P49406 292 aaKnown RBP13.18□□□□□ -0.3
RNF4-202ENST00000502316 SLC37A1P57057 533 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 MFAP5Q13361 173 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
RNF4-202ENST00000502316 LTB4RQ15722 352 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 C6orf163Q5TEZ5 329 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 TMEM198Q66K66 360 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 NXNQ6DKJ4 435 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 IGFL3Q6UXB1 125 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 ISLR2Q6UXK2 745 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 HSDL2Q6YN16 418 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 HPS6Q86YV9 775 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 SLC5A8Q8N695 610 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 NATD1Q8N6N6 113 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 OR7G1Q8NGA0 311 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 OR7A2PQ8NGA2 310 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 OR9A2Q8NGT5 310 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 TESCQ96BS2 214 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 AMDHD1Q96NU7 426 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 LMF1Q96S06 567 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 PRPF18Q99633 342 aaKnown RBP13.18□□□□□ -0.3
RNF4-202ENST00000502316 CNPPD1Q9BV87 410 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 DEFB126Q9BYW3 111 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 GLIPR2Q9H4G4 154 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 NPHS2Q9NP85 383 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 ACSS1Q9NUB1 689 aaPredicted RBP13.18□□□□□ -0.3
RNF4-202ENST00000502316 ATAD3AQ9NVI7 634 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
RNF4-202ENST00000502316 SH3BP4Q9P0V3 963 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 PTGFRNQ9P2B2 879 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 TEKT2Q9UIF3 430 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 TP53TG5Q9Y2B4 290 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
RNF4-202ENST00000502316 PRRC2CQ9Y520 2896 aaKnown RBP13.17□□□□□ -0.3
RNF4-202ENST00000502316 TMEM200CA6NKL6 621 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 OR6C76A6NM76 312 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 PLOD2O00469 737 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 CDK2AP1O14519 115 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 UBDO15205 165 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 PRKNO60260 465 aaPredicted RBP13.17□□□□□ -0.3
RNF4-202ENST00000502316 PLOD3O60568 738 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 ZFAND5O76080 213 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 VIMP08670 466 aaKnown RBP13.17□□□□□ -0.3
RNF4-202ENST00000502316 LAMP1P11279 417 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 SSTR4P31391 388 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 PTGER1P34995 402 aa13.17□□□□□ -0.3
RNF4-202ENST00000502316 NCBP2P52298 156 aaKnown RBP eCLIP13.17□□□□□ -0.35e-11■■■□□ 14.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms