RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GPX5O75715 221 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 UGT2B17O75795 530 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 EPPINO95925 133 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ALPPL2P10696 532 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 CKMT1AP12532 417 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 FCARP24071 287 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 GTF2E2P29084 291 aaKnown RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 GPC1P35052 558 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 BCL6P41182 706 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 SOX3P41225 446 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 LSM11P83369 360 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 FUT5Q11128 374 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TARDBPQ13148 414 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 FGL2Q14314 439 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 MLC1Q15049 377 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 GPR19Q15760 415 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ZNF181Q2M3W8 571 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TOR1AIP1Q5JTV8 583 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TMEM201Q5SNT2 666 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 GET4Q7L5D6 327 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TBC1D19Q8N5T2 526 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 OR2A1Q8NGT9 310 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 HTRA1Q92743 480 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 KLK6Q92876 244 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ITFG2Q969R8 447 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ITPKCQ96DU7 683 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 CHFRQ96EP1 664 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 PITHD1Q9GZP4 211 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 POLR2J3Q9H1A7 115 aaKnown RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 WDR26Q9H7D7 661 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 HHATLQ9HCP6 504 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ZCCHC3Q9NUD5 404 aaKnown RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 IMP3Q9NV31 184 aaKnown RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 TAS2R7Q9NYW3 318 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 KCNK6Q9Y257 313 aa9.32□□□□□ -0.92
CLIP1-204ENST00000501271 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 DNMT3AQ9Y6K1 912 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-204ENST00000501271 SAGE2PA6NJ88 616 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CSO75390 466 aaKnown RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CLEC3AO75596 197 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CHRM4P08173 479 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 NR2F1P10589 423 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 DDX5P17844 614 aaKnown RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 S100A5P33763 92 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 GSTM5P46439 218 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 EIF2B2P49770 351 aaKnown RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 NCBP2P52298 156 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 ZNF91Q05481 1191 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 PRKCDQ05655 676 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 DUSP2Q05923 314 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 PRDX1Q06830 199 aaKnown RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 HYAL2Q12891 473 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 PDGFRLQ15198 375 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 ZNF750Q32MQ0 723 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 PODNL1Q6PEZ8 512 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 FAM92BQ6ZTR7 304 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 TRIM73Q86UV7 250 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 RASSF5Q8WWW0 418 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 YIPF4Q9BSR8 244 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 SLC35C2Q9NQQ7 365 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 MAN2C1Q9NTJ4 1040 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 SACM1LQ9NTJ5 587 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CAB39Q9Y376 341 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 PLEKHM1Q9Y4G2 1056 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 DOCK8Q8NF50 2099 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 A0A1W2PS29 197 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 ISPDA4D126 451 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 OR52A4PA6NMU1 304 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 MAN2B1O00754 1011 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 NME6O75414 186 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 PAK4O96013 591 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 SCG5P05408 212 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 TNNI3P19429 210 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CSTF2P33240 577 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 GJA4P35212 333 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 RAB28P51157 221 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 PRKAG1P54619 331 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 TRA2BP62995 288 aaKnown RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 RHAGQ02094 409 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 ZNF45Q02386 682 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CDC20Q12834 499 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CST6Q15828 149 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 C2orf27AQ580R0 203 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 TANGO2Q6ICL3 276 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CASP12Q6UXS9 341 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 SLC34A3Q8N130 599 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 TCEANCQ8N8B7 351 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 OR8K5Q8NH50 307 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 KLHL6Q8WZ60 621 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CAMK1GQ96NX5 476 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 SP140LQ9H930 580 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 SYNPO2LQ9H987 977 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 SLC6A20Q9NP91 592 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 CTPS2Q9NRF8 586 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 DPP7Q9UHL4 492 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 ACSL5Q9ULC5 683 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 ZFR2Q9UPR6 939 aaKnown RBP9.31□□□□□ -0.92
CLIP1-204ENST00000501271 RWDD3Q9Y3V2 267 aa9.31□□□□□ -0.92
CLIP1-204ENST00000501271 A0A1W2PP55 124 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms