RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 SLC35E2P0CK97 266 aa23.28■■□□□ 1.32
MKRN1-216ENST00000498535 UQCRC1P31930 480 aa23.28■■□□□ 1.32
MKRN1-216ENST00000498535 BSGP35613 385 aa23.28■■□□□ 1.32
MKRN1-216ENST00000498535 MRM1Q6IN84 353 aaKnown RBP23.28■■□□□ 1.32
MKRN1-216ENST00000498535 NUDT13Q86X67 352 aa23.28■■□□□ 1.32
MKRN1-216ENST00000498535 NINJ1Q92982 152 aa23.28■■□□□ 1.32
MKRN1-216ENST00000498535 ZNF717Q9BY31 904 aaPredicted RBP23.28■■□□□ 1.32
MKRN1-216ENST00000498535 RAB17Q9H0T7 212 aa23.28■■□□□ 1.32
MKRN1-216ENST00000498535 IPPKQ9H8X2 491 aa23.28■■□□□ 1.32
MKRN1-216ENST00000498535 SNX15Q9NRS6 342 aa23.28■■□□□ 1.32
MKRN1-216ENST00000498535 NCKAP5O14513 1909 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 ANKRD33BA6NCL7 494 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 TRAPPC6AO75865 159 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 PIK3CGP48736 1102 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 C2orf54Q08AI8 447 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 SNTB1Q13884 538 aaKnown RBP23.27■■□□□ 1.32
MKRN1-216ENST00000498535 GTF2H2Q13888 395 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 ACAP2Q15057 778 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 MROH9Q5TGP6 573 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 GTF2H2CQ6P1K8 395 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 CENPLQ8N0S6 344 aaPredicted RBP23.27■■□□□ 1.32
MKRN1-216ENST00000498535 CHDHQ8NE62 594 aaPredicted RBP23.27■■□□□ 1.32
MKRN1-216ENST00000498535 FBXO25Q8TCJ0 367 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 TP53INP1Q96A56 240 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 PSD3Q9NYI0 1048 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 EDARQ9UNE0 448 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 TNPO3Q9Y5L0 923 aaKnown RBP23.27■■□□□ 1.32
MKRN1-216ENST00000498535 ABCA4P78363 2273 aa23.27■■□□□ 1.32
MKRN1-216ENST00000498535 FREM3P0C091 2139 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 SYT5O00445 386 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 TRIM3O75382 744 aaPredicted RBP23.26■■□□□ 1.31
MKRN1-216ENST00000498535 AIFM1O95831 613 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 C2P06681 752 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 CD99P14209 185 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 BMP5P22003 454 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 PIK3R1P27986 724 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 ARL1P40616 181 aaPredicted RBP23.26■■□□□ 1.31
MKRN1-216ENST00000498535 TMED10P49755 219 aaKnown RBP23.26■■□□□ 1.31
MKRN1-216ENST00000498535 IRF9Q00978 393 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 DUSP8Q13202 625 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 RPS6KA2Q15349 733 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 PCBP2Q15366 365 aaKnown RBP eCLIP23.26■■□□□ 1.31
MKRN1-216ENST00000498535 SF3B4Q15427 424 aaKnown RBP eCLIP23.26■■□□□ 1.315e-7■■□□□ 12.5
MKRN1-216ENST00000498535 OR52E8Q6IFG1 317 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 KLC3Q6P597 504 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 TMEM64Q6YI46 380 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 GOLGA7Q7Z5G4 137 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 FOXC2Q99958 501 aa23.26■■□□□ 1.31
MKRN1-216ENST00000498535 GPATCH1Q9BRR8 931 aaKnown RBP23.26■■□□□ 1.31
MKRN1-216ENST00000498535 CCM2LQ9NUG4 571 aaPredicted RBP23.26■■□□□ 1.31
MKRN1-216ENST00000498535 FOXE1O00358 373 aaPredicted RBP23.25■■□□□ 1.31
MKRN1-216ENST00000498535 SNX4O95219 450 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 EPPINO95925 133 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 SSTR4P31391 388 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 MASP1P48740 699 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 NEK2P51955 445 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 NRG3P56975 720 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 FBXW4P57775 412 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 RPP38P78345 283 aaKnown RBP23.25■■□□□ 1.31
MKRN1-216ENST00000498535 C6orf163Q5TEZ5 329 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 SEM1Q6ZVN7 128 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 PACS2Q86VP3 889 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 GALNT12Q8IXK2 581 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 ATP6V1E2Q96A05 226 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 MRRFQ96E11 262 aaKnown RBP23.25■■□□□ 1.31
MKRN1-216ENST00000498535 RILPQ96NA2 401 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 SERPINI1Q99574 410 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 CLEC4MQ9H2X3 399 aaPredicted RBP23.25■■□□□ 1.31
MKRN1-216ENST00000498535 CXorf21Q9HAI6 301 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 CRIM1Q9NZV1 1036 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 CPSF2Q9P2I0 782 aaKnown RBP23.25■■□□□ 1.31
MKRN1-216ENST00000498535 MTRF1LQ9UGC7 380 aaKnown RBP23.25■■□□□ 1.31
MKRN1-216ENST00000498535 RNF11Q9Y3C5 154 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 NPFFR2Q9Y5X5 522 aa23.25■■□□□ 1.31
MKRN1-216ENST00000498535 PRRC2AP48634 2157 aaKnown RBP23.25■■□□□ 1.31
MKRN1-216ENST00000498535 LRRC14BA6NHZ5 514 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 CLDN9O95484 217 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 IL2RAP01589 272 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 GBAP04062 536 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 CLPSP04118 112 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 ASCL1P50553 236 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 ACSF3Q4G176 576 aaPredicted RBP23.24■■□□□ 1.31
MKRN1-216ENST00000498535 METTL2BQ6P1Q9 378 aaKnown RBP23.24■■□□□ 1.31
MKRN1-216ENST00000498535 LACC1Q8IV20 430 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 PM20D2Q8IYS1 436 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 ZNF441Q8N8Z8 693 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 L3MBTL4Q8NA19 623 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 GOT1L1Q8NHS2 421 aaPredicted RBP23.24■■□□□ 1.31
MKRN1-216ENST00000498535 WDR20Q8TBZ3 569 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 RMND5BQ96G75 393 aaPredicted RBP23.24■■□□□ 1.31
MKRN1-216ENST00000498535 SECISBP2Q96T21 854 aaKnown RBP23.24■■□□□ 1.31
MKRN1-216ENST00000498535 TIMP4Q99727 224 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 RASSF1Q9NS23 344 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 ST6GALNAC2Q9UJ37 374 aa23.24■■□□□ 1.31
MKRN1-216ENST00000498535 A0A096LPK6 155 aa23.23■■□□□ 1.31
MKRN1-216ENST00000498535 PGRMC2O15173 223 aa23.23■■□□□ 1.31
MKRN1-216ENST00000498535 DIAPH2O60879 1101 aa23.23■■□□□ 1.31
MKRN1-216ENST00000498535 KLHL2O95198 593 aa23.23■■□□□ 1.31
MKRN1-216ENST00000498535 ACSL3O95573 720 aa23.23■■□□□ 1.31
MKRN1-216ENST00000498535 CEACAM8P31997 349 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms