RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 ATP5A1P25705 553 aaKnown RBP11.5□□□□□ -0.57
TRIM27-207ENST00000498117 PTPN6P29350 595 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 CASP3P42574 277 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 GDF5P43026 501 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 TMED10P49755 219 aaKnown RBP11.5□□□□□ -0.57
TRIM27-207ENST00000498117 NR1H2P55055 460 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 SLC37A1P57057 533 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 HERVK_113P63132 956 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 ERVK-8P63133 956 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 PCDH1Q08174 1060 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 ZNF267Q14586 743 aaPredicted RBP11.5□□□□□ -0.57
TRIM27-207ENST00000498117 KCTD19Q17RG1 926 aaPredicted RBP11.5□□□□□ -0.57
TRIM27-207ENST00000498117 AP5B1Q2VPB7 878 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 TMEM64Q6YI46 380 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 ZNF793Q6ZN11 406 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 DGAT2L6Q6ZPD8 337 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 RNF10Q8N5U6 811 aaKnown RBP11.5□□□□□ -0.57
TRIM27-207ENST00000498117 MAPK1IP1LQ8NDC0 245 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 OR1J4Q8NGS1 313 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 TANKQ92844 425 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 TP53INP1Q96A56 240 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 MARK4Q96L34 752 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 SIGLEC10Q96LC7 697 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 PELOQ9BRX2 385 aaKnown RBP11.5□□□□□ -0.57
TRIM27-207ENST00000498117 SLC39A3Q9BRY0 314 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 ERVK-6Q9BXR3 956 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 EHD1Q9H4M9 534 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 RPF2Q9H7B2 306 aaKnown RBP11.5□□□□□ -0.57
TRIM27-207ENST00000498117 YAE1D1Q9NRH1 226 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 MS4A12Q9NXJ0 267 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 ELOVL5Q9NYP7 299 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 WWOXQ9NZC7 414 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 GPRC5BQ9NZH0 403 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 CLCF1Q9UBD9 225 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 IKZF3Q9UKT9 509 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 ERVK-19Q9WJR5 959 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 MED12LQ86YW9 2145 aa11.5□□□□□ -0.57
TRIM27-207ENST00000498117 CUBNO60494 3623 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 HEATR5AQ86XA9 2040 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 A0A087X1B8 175 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 C2orf92A0A1B0GVN3 265 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 A0A1W2PNV4 684 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 C16orf97H3BN30 126 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 CD5LO43866 347 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 POU2F1P14859 743 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 HIST1H1TP22492 207 aaPredicted RBP11.49□□□□□ -0.57
TRIM27-207ENST00000498117 UGT2B10P36537 528 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 PGGT1BP53609 377 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 VEZF1Q14119 521 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 SETDB1Q15047 1291 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 CLEC12BQ2HXU8 276 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 SPRED3Q2MJR0 410 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 C10orf62Q5T681 223 aaPredicted RBP11.49□□□□□ -0.57
TRIM27-207ENST00000498117 HLA-DQA1Q5Y7H0 255 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 UBE3DQ7Z6J8 389 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 GALNT7Q86SF2 657 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 GRAMD2AQ8IUY3 354 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 ST13P4Q8IZP2 240 aaPredicted RBP11.49□□□□□ -0.57
TRIM27-207ENST00000498117 RNF214Q8ND24 703 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 DOK4Q8TEW6 326 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 STARD4Q96DR4 205 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 ZC3HAV1LQ96H79 300 aaKnown RBP11.49□□□□□ -0.57
TRIM27-207ENST00000498117 VPS39Q96JC1 886 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 KRT12Q99456 494 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 PIGQQ9BRB3 760 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 REG4Q9BYZ8 158 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 ZNF490Q9ULM2 529 aaPredicted RBP11.49□□□□□ -0.57
TRIM27-207ENST00000498117 WIF1Q9Y5W5 379 aa11.49□□□□□ -0.57
TRIM27-207ENST00000498117 RTCAO00442 366 aaKnown RBP11.48□□□□□ -0.57
TRIM27-207ENST00000498117 CLGNO14967 610 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 OR10H2O60403 315 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 SCELO95171 688 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 KRT14P02533 472 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 LOXP28300 417 aaPredicted RBP11.48□□□□□ -0.57
TRIM27-207ENST00000498117 TLX1P31314 330 aaPredicted RBP11.48□□□□□ -0.57
TRIM27-207ENST00000498117 MAGEA3P43357 314 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 SLC6A12P48065 614 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 NRG3P56975 720 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 ETFDHQ16134 617 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 HIST2H2ACQ16777 129 aaPredicted RBP11.48□□□□□ -0.57
TRIM27-207ENST00000498117 TMEM35AQ53FP2 167 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 HIST2H2AA3Q6FI13 130 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 ADNP2Q6IQ32 1131 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 FAM45BPQ6NSW5 357 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 ZNF474Q6S9Z5 364 aaPredicted RBP11.48□□□□□ -0.57
TRIM27-207ENST00000498117 PLXDC2Q6UX71 529 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 ANGPTL8Q6UXH0 198 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 ZNF550Q7Z398 422 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 BTLAQ7Z6A9 289 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 CNTN4Q8IWV2 1026 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 TRIM42Q8IWZ5 723 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 AGGF1Q8N302 714 aaeCLIP11.48□□□□□ -0.57
TRIM27-207ENST00000498117 CNEP1R1Q8N9A8 125 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 FAM45AQ8TCE6 357 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 RIT1Q92963 219 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 RHBDF1Q96CC6 855 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 PTCD3Q96EY7 689 aaKnown RBP11.48□□□□□ -0.57
TRIM27-207ENST00000498117 PGM2Q96G03 612 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 G6PC3Q9BUM1 346 aa11.48□□□□□ -0.57
TRIM27-207ENST00000498117 PHACTR1Q9C0D0 580 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms