RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ERVK-19Q9WJR5 959 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 CLCA3PQ9Y6N3 262 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 CELSR3Q9NYQ7 3312 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 LOC102723996A0A087X1L8 192 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 RNASET2O00584 256 aaKnown RBP12.67□□□□□ -0.38
CPNE1-227ENST00000498056 SLC22A2O15244 555 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 ANP32DO95626 131 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 CPSF4O95639 269 aaKnown RBP12.67□□□□□ -0.38
CPNE1-227ENST00000498056 SNRPB2P08579 225 aaKnown RBP12.67□□□□□ -0.38
CPNE1-227ENST00000498056 CT62P0C5K7 136 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 FRKP42685 505 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-227ENST00000498056 WNT3P56703 355 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF267Q14586 743 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-227ENST00000498056 SPDYE7PQ495Y7 208 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 VPS26BQ4G0F5 336 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF628Q5EBL2 1059 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 SLC2A7Q6PXP3 512 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 KIRREL2Q6UWL6 708 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 CCDC81Q6ZN84 652 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 PROSER1Q86XN7 944 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 ZSCAN1Q8NBB4 408 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 C7orf57Q8NEG2 295 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 VPS37AQ8NEZ2 397 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 OR5AK3PQ8NH89 298 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 ADAMTS17Q8TE56 1095 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 MAGED4Q96JG8 741 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 ART5Q96L15 291 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 PANX1Q96RD7 426 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 SLC25A23Q9BV35 468 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 CCDC106Q9BWC9 280 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 ACSS1Q9NUB1 689 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-227ENST00000498056 DDX18Q9NVP1 670 aaKnown RBP12.67□□□□□ -0.38
CPNE1-227ENST00000498056 TMEM45AQ9NWC5 275 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 MAT2BQ9NZL9 334 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 COPS7AQ9UBW8 275 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 PCDHGB4Q9UN71 923 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 MAN2B2Q9Y2E5 1009 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 SNX8Q9Y5X2 465 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 CHD8Q9HCK8 2581 aa12.67□□□□□ -0.38
CPNE1-227ENST00000498056 ASPDHA6ND91 283 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 MASP2O00187 686 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 RFXANKO14593 260 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 NKX2-8O15522 239 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 EFSO43281 561 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 HPP00738 406 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 ADSLP30566 484 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-227ENST00000498056 SLC26A5P58743 744 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 PHC1P78364 1004 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 TLE3Q04726 772 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 BIKQ13323 160 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 GAB1Q13480 694 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 EXOSC7Q15024 291 aaKnown RBP12.66□□□□□ -0.38
CPNE1-227ENST00000498056 MAPKAPK3Q16644 382 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 SPRED3Q2MJR0 410 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 PRICKLE4Q2TBC4 344 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 BTBD16Q32M84 506 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 MMEL1Q495T6 779 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 CPZQ66K79 652 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 REP15Q6BDI9 236 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 FAM111BQ6SJ93 734 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 ANGPTL8Q6UXH0 198 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 MSANTD1Q6ZTZ1 278 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 TREML1Q86YW5 311 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 OR7G2Q8NG99 324 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 SLC2A12Q8TD20 617 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF675Q8TD23 568 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 PTPMT1Q8WUK0 201 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-227ENST00000498056 OR5P2Q8WZ92 322 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 DAZLQ92904 295 aaKnown RBP12.66□□□□□ -0.38
CPNE1-227ENST00000498056 ITCHQ96J02 903 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 WDR77Q9BQA1 342 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-227ENST00000498056 INPP5KQ9BT40 448 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 TUBB6Q9BUF5 446 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF700Q9H0M5 742 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 ANKRA2Q9H9E1 313 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 CXorf21Q9HAI6 301 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 BCAP29Q9UHQ4 241 aa12.66□□□□□ -0.38
CPNE1-227ENST00000498056 LEF1Q9UJU2 399 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-227ENST00000498056 TNRC6AQ8NDV7 1962 aaKnown RBP12.66□□□□□ -0.38
CPNE1-227ENST00000498056 TRBV11-1A0A0K0K1C0 115 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 RNF103-CHMP3A0A140T963 221 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 PRSS51A0A1B0GVH4 220 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 DYTNA2CJ06 578 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 TMEM8BA6NDV4 472 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 ARGFXA6NJG6 315 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 BBIP1A8MTZ0 92 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 HRKO00198 91 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 MRASO14807 208 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 CAPNS1P04632 268 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 GSNP06396 782 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 SSTR4P31391 388 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 CDKN2CP42773 168 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 TMPRSS3P57727 454 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 HBA1P69905 142 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF155Q12901 538 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-227ENST00000498056 CHAF1BQ13112 559 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 CYLC2Q14093 348 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-227ENST00000498056 TERF2Q15554 542 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 RNF111Q6ZNA4 994 aa12.65□□□□□ -0.38
CPNE1-227ENST00000498056 NDUFAF7Q7L592 441 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms