RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 IMPG1Q17R60 797 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 C1QL3Q5VWW1 255 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 C16orf47Q6ZP98 133 aaPredicted RBP14.23□□□□□ -0.13
NUP50-219ENST00000497960 FJX1Q86VR8 437 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 ST13P4Q8IZP2 240 aaPredicted RBP14.23□□□□□ -0.13
NUP50-219ENST00000497960 ARFGAP2Q8N6H7 521 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 ZNF321PQ8N8H1 164 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 POGLUT1Q8NBL1 392 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 OR6Y1Q8NGX8 325 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 ZNF721Q8TF20 911 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 RELTQ969Z4 430 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 PPWD1Q96BP3 646 aaKnown RBP14.23□□□□□ -0.13
NUP50-219ENST00000497960 SENP5Q96HI0 755 aaPredicted RBP14.23□□□□□ -0.13
NUP50-219ENST00000497960 GPR137Q96N19 417 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 TSPAN10Q9H1Z9 355 aaPredicted RBP14.23□□□□□ -0.13
NUP50-219ENST00000497960 LIN28AQ9H9Z2 209 aaKnown RBP14.23□□□□□ -0.13
NUP50-219ENST00000497960 TNFRSF12AQ9NP84 129 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 FARSBQ9NSD9 589 aaKnown RBP14.23□□□□□ -0.13
NUP50-219ENST00000497960 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.23□□□□□ -0.13
NUP50-219ENST00000497960 SLC12A4Q9UP95 1085 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 GLOD5A6NK44 160 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 TMEM200CA6NKL6 621 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 TMEM233B4DJY2 109 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 PEX1O43933 1283 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 GUCY1B2O75343 617 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 ULK1O75385 1050 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 SNUPNO95149 360 aaKnown RBP14.22□□□□□ -0.13
NUP50-219ENST00000497960 AIFM1O95831 613 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 ARRB2P32121 409 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 MEOX1P50221 254 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 HK2P52789 917 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 CSTF3Q12996 717 aaKnown RBP14.22□□□□□ -0.13
NUP50-219ENST00000497960 CCNYL2Q5T2Q4 361 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 CES4AQ5XG92 561 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 KANK2Q63ZY3 851 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 OR52E8Q6IFG1 317 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 IL20RBQ6UXL0 311 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 MAMDC2Q7Z304 686 aaPredicted RBP14.22□□□□□ -0.13
NUP50-219ENST00000497960 SULF2Q8IWU5 870 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 METTL4Q8N3J2 472 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 CPSF7Q8N684 471 aaKnown RBP14.22□□□□□ -0.13
NUP50-219ENST00000497960 LRRC8CQ8TDW0 803 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 MAGED4Q96JG8 741 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 RASL10BQ96S79 203 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 CNPPD1Q9BV87 410 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 MRPL1Q9BYD6 325 aaKnown RBP14.22□□□□□ -0.13
NUP50-219ENST00000497960 MANSC1Q9H8J5 431 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 BRF2Q9HAW0 419 aa14.22□□□□□ -0.13
NUP50-219ENST00000497960 SUCOQ9UBS9 1254 aaKnown RBP14.22□□□□□ -0.13
NUP50-219ENST00000497960 ASNA1O43681 348 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 SLC19A2O60779 497 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 SKAP2O75563 359 aaPredicted RBP14.21□□□□□ -0.13
NUP50-219ENST00000497960 OR6B1O95007 311 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 HSD3B1P14060 373 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 HSD3B2P26439 372 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 PIK3R1P27986 724 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 SERPINB3P29508 390 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 SOX3P41225 446 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 MAPK12P53778 367 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 ZNF267Q14586 743 aaPredicted RBP14.21□□□□□ -0.13
NUP50-219ENST00000497960 OPN5Q6U736 354 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 SCIMPQ6UWF3 145 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 MDGA2Q7Z553 956 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 KIRREL3Q8IZU9 778 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 GHDCQ8N2G8 530 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 ZNF781Q8N8C0 355 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 NUBPLQ8TB37 319 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 TWIST2Q8WVJ9 160 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 RIT1Q92963 219 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 FBXL20Q96IG2 436 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 RAP2CQ9Y3L5 183 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 TRAF6Q9Y4K3 522 aa14.21□□□□□ -0.13
NUP50-219ENST00000497960 PCNX1Q96RV3 2341 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 WASHC1A8K0Z3 465 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 CCL21O00585 134 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 TFECO14948 347 aaPredicted RBP14.2□□□□□ -0.14
NUP50-219ENST00000497960 IGKV3-11P04433 115 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 SLC35E2P0CK97 266 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 GALNSP34059 522 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 CA7P43166 264 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 ERVK-8P63133 956 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 MPEG1Q2M385 716 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 SPRED3Q2MJR0 410 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 NDUFAF5Q5TEU4 345 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 MTFR2Q6P444 385 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 DGAT2L6Q6ZPD8 337 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 RTL4Q6ZR62 310 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 COMMD6Q7Z4G1 85 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 SIAH3Q8IW03 269 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 HOMEZQ8IX15 550 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 DDIASQ8IXT1 998 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 CLYBLQ8N0X4 340 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 GBP7Q8N8V2 638 aaPredicted RBP14.2□□□□□ -0.14
NUP50-219ENST00000497960 PSD4Q8NDX1 1056 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 OR4K14Q8NGD5 310 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 FAM76AQ8TAV0 307 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 SLC22A8Q8TCC7 542 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 ZNF75CPQ92670 426 aaPredicted RBP14.2□□□□□ -0.14
NUP50-219ENST00000497960 SGCZQ96LD1 299 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 SORT1Q99523 831 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms