RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TSTA3Q13630 321 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CYLC2Q14093 348 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 GK2Q14410 553 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 UNC50Q53HI1 259 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CMPK2Q5EBM0 449 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 VWA2Q5GFL6 755 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 NHLRC3Q5JS37 347 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 TEX35Q5T0J7 233 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 MARC1Q5VT66 337 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 STEAP1BQ6NZ63 245 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 ZNF410Q86VK4 478 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 HPS6Q86YV9 775 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CCDC71Q8IV32 467 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 ZBED8Q8IZ13 594 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 GPD1LQ8N335 351 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 RELL2Q8NC24 303 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 MGARPQ8TDB4 240 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 ITLN1Q8WWA0 313 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 HIST1H2ACQ93077 130 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 SERAC1Q96JX3 654 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CABS1Q96KC9 395 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 FOXN4Q96NZ1 517 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 APOL2Q9BQE5 337 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CXXC4Q9H2H0 198 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 DCTPP1Q9H773 170 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 IL1RL2Q9HB29 575 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 DNAJC11Q9NVH1 559 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 TECRQ9NZ01 308 aaKnown RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 RSPH14Q9UHP6 348 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 IGHV3-16A0A0C4DH30 117 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 A0A0J9YVX5 310 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 MACROD2A1Z1Q3 448 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 FOXI3A8MTJ6 420 aaPredicted RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 EI24O14681 340 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 SH2D1BO14796 132 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 KINO60870 393 aaKnown RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 RHBDL1O75783 438 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 TXNDC12O95881 172 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 IGHG1P01857 330 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 FAM200BP0CF97 657 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 HMGCLP35914 325 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 ELK3P41970 407 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 PITPNBP48739 271 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 IST1P53990 364 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 HMGCS2P54868 508 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 RPS4XP62701 263 aaKnown RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 NOP14P78316 857 aaKnown RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 ACTN3Q08043 901 aaPredicted RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 RUNX3Q13761 415 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 PDE7AQ13946 482 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 EXOSC7Q15024 291 aaKnown RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 SHROOM1Q2M3G4 852 aaPredicted RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 NKAIN2Q5VXU1 208 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 SLC22A18ASQ8N1D0 253 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 PYROXD2Q8N2H3 581 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 FGFRL1Q8N441 504 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 MLKLQ8NB16 471 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 CSNK1G2-AS1Q8NCQ2 148 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 CHDHQ8NE62 594 aaPredicted RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 TBCKQ8TEA7 893 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 RAB39BQ96DA2 213 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 RAB3CQ96E17 227 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 ZBED6CLQ96FA7 236 aaPredicted RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 PRAM1Q96QH2 718 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 TIGARQ9NQ88 270 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.58□□□□□ -2
PSPC1-205ENST00000497722 HOMER3Q9NSC5 361 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 HMG20BQ9P0W2 317 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 CIDEBQ9UHD4 219 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 MOSPD1Q9UJG1 213 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 SLC6A5Q9Y345 797 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 MRPS2Q9Y399 296 aaKnown RBP2.58□□□□□ -2
PSPC1-205ENST00000497722 RPGRIP1LQ68CZ1 1315 aa2.58□□□□□ -2
PSPC1-205ENST00000497722 IGLV3-10A0A075B6K4 115 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 TRAV9-2A0A087WT02 112 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 A0A1W2PPR1 153 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 SRRM4A7MD48 611 aaKnown RBP2.57□□□□□ -2
PSPC1-205ENST00000497722 TSPAN2O60636 221 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 REC8O95072 547 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 SYNGR4O95473 234 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 BAG2O95816 211 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 GOT2P00505 430 aaKnown RBP2.57□□□□□ -2
PSPC1-205ENST00000497722 PIGRP01833 764 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 FCER2P06734 321 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 APRTP07741 180 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 CCDC192P0DO97 292 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 FOLR2P14207 255 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 FOSL2P15408 326 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 TMOD1P28289 359 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 ARHGDIAP52565 204 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 ZNF131P52739 623 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 MFAP2P55001 183 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 SSTP61278 116 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 AP1B1Q10567 949 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 PPP2R5CQ13362 524 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 KLF5Q13887 457 aaPredicted RBP2.57□□□□□ -2
PSPC1-205ENST00000497722 SLC10A1Q14973 349 aa2.57□□□□□ -2
PSPC1-205ENST00000497722 C14orf28Q4W4Y0 310 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms