RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TGIF1Q15583 401 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 SFT2D3Q587I9 215 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 ZNF628Q5EBL2 1059 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 ZCCHC12Q6PEW1 402 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 KIRREL2Q6UWL6 708 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 HACD2Q6Y1H2 254 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 RIPOR1Q6ZS17 1223 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 PPP1R32Q7Z5V6 425 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 OR4N5Q8IXE1 308 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 OR2L13Q8N349 312 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 OR11G2Q8NGC1 345 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 ROPN1LQ96C74 230 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 ELP4Q96EB1 424 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 IMMP1LQ96LU5 166 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 WDR77Q9BQA1 342 aaPredicted RBP18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 C3orf14Q9HBI5 128 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 MAT2BQ9NZL9 334 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 ARMCX1Q9P291 453 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 IL17BQ9UHF5 180 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 A0A096LPI6 279 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 NR5A2O00482 541 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 PEX12O00623 359 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 IGKV3-11P04433 115 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 IFNA16P05015 189 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 HBA1P69905 142 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 VPS26BQ4G0F5 336 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 TIGD2Q4W5G0 525 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 PLAG1Q6DJT9 500 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 ANKRD26P1Q6NSI1 321 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 C6orf89Q6UWU4 347 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 TREML1Q86YW5 311 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 PRSS58Q8IYP2 241 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 VWA5B2Q8N398 1253 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 NFAM1Q8NET5 270 aaPredicted RBP18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 B3GNT7Q8NFL0 401 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 M1APQ8TC57 530 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 CIDECQ96AQ7 238 aaPredicted RBP18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 EFCAB1Q9HAE3 211 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 GIN1Q9NXP7 522 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 TAGLN3Q9UI15 199 aa18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 C19orf53Q9UNZ5 99 aaPredicted RBP18.43■□□□□ 0.54
SCAMP3-209ENST00000497470 CCT8L1PA6NM43 557 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 RFXANKO14593 260 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 HNRNPCL1O60812 293 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 COQ9O75208 318 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 PSMG1O95456 288 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 COX6A1P12074 109 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 S1PR1P21453 382 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 NT5EP21589 574 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 UQCRC2P22695 453 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 PPIBP23284 216 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 PTPN6P29350 595 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 SOX8P57073 446 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 PRR5P85299 388 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 VAC14Q08AM6 782 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 PCOLCEQ15113 449 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 FHL5Q5TD97 284 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 PAPD4Q6PIY7 484 aaKnown RBP18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 GK5Q6ZS86 529 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 SHISA6Q6ZSJ9 500 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 MRGPREQ86SM8 312 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 ARMC10Q8N2F6 343 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 TMEM102Q8N9M5 508 aaPredicted RBP18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 C17orf47Q8NEP4 570 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 OR56A1Q8NGH5 318 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 OR1N1Q8NGS0 311 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 VPS33AQ96AX1 596 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 SENP5Q96HI0 755 aaPredicted RBP18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 FER1L6-AS2Q96M78 137 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 PANX1Q96RD7 426 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 SIRT3Q9NTG7 399 aaPredicted RBP18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 GID8Q9NWU2 228 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 VPS4AQ9UN37 437 aa18.42■□□□□ 0.54
SCAMP3-209ENST00000497470 A0A087WV48 116 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 MED19A0JLT2 244 aaPredicted RBP18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 ASPDHA6ND91 283 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 C17orf105B2RV13 164 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 EMC8O43402 210 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 KCNH1O95259 989 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 C6orf47O95873 294 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 HOXB9P17482 250 aaPredicted RBP18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 TNNI3P19429 210 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 CALB2P22676 271 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 SOX18P35713 384 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 RRADP55042 308 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 DUSP2Q05923 314 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 UNQ6494/PRO21346Q6UXR6 183 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 LANCL3Q6ZV70 420 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 ZNF551Q7Z340 670 aaPredicted RBP18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 SNX32Q86XE0 403 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 ZSCAN1Q8NBB4 408 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 OR9A2Q8NGT5 310 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 SNRNP27Q8WVK2 155 aaKnown RBP18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 HOXB13Q92826 284 aaPredicted RBP18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 NSL1Q96IY1 281 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 TRIM4Q9C037 500 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 MMP25Q9NPA2 562 aa18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 PNO1Q9NRX1 252 aaKnown RBP18.41■□□□□ 0.54
SCAMP3-209ENST00000497470 P4HTMQ9NXG6 502 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms