RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 TRMT5Q32P41 509 aaKnown RBP17.08■□□□□ 0.32
RGP1-202ENST00000496906 ANKRD37Q7Z713 158 aa17.08■□□□□ 0.32
RGP1-202ENST00000496906 DNAJB8Q8NHS0 232 aa17.08■□□□□ 0.32
RGP1-202ENST00000496906 MESP1Q9BRJ9 268 aa17.08■□□□□ 0.32
RGP1-202ENST00000496906 CXorf21Q9HAI6 301 aa17.08■□□□□ 0.32
RGP1-202ENST00000496906 PNO1Q9NRX1 252 aaKnown RBP17.08■□□□□ 0.32
RGP1-202ENST00000496906 MAT2BQ9NZL9 334 aa17.08■□□□□ 0.32
RGP1-202ENST00000496906 KCND3Q9UK17 655 aa17.08■□□□□ 0.32
RGP1-202ENST00000496906 CCDC88CQ9P219 2028 aa17.08■□□□□ 0.32
RGP1-202ENST00000496906 FXYD1O00168 92 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 UNC5CO95185 931 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 GSNP06396 782 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 CT62P0C5K7 136 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 GPC1P35052 558 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 MRPS35P82673 323 aaKnown RBP17.07■□□□□ 0.32
RGP1-202ENST00000496906 MGAT2Q10469 447 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 ELAVL1Q15717 326 aaKnown RBP17.07■□□□□ 0.32
RGP1-202ENST00000496906 SPRED3Q2MJR0 410 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 GTDC1Q4AE62 458 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 TMEM107Q6UX40 140 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 HACD2Q6Y1H2 254 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 GALNT12Q8IXK2 581 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 MSRB3Q8IXL7 192 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 FBXO27Q8NI29 283 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 KAT2AQ92830 837 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 RIT1Q92963 219 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 ROPN1LQ96C74 230 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 CTHRC1Q96CG8 243 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 ELP4Q96EB1 424 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 PHF12Q96QT6 1004 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 IL1RL2Q9HB29 575 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 SLC25A37Q9NYZ2 338 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 VPS4AQ9UN37 437 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 PCDHB14Q9Y5E9 798 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 ASPMQ8IZT6 3477 aa17.07■□□□□ 0.32
RGP1-202ENST00000496906 TRBV5-3A0A0A0MS03 114 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 PLOD2O00469 737 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 PCDH17O14917 1159 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 RRP9O43818 475 aaKnown RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 SLITRK5O94991 958 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 ANP32DO95626 131 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 NPPAP01160 153 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 IGHEP01854 428 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 IFI6P09912 130 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 ZCCHC18P0CG32 403 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 MMP11P24347 488 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 MC3RP41968 323 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 OR4D2P58180 307 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 MAP4K2Q12851 820 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 ART3Q13508 389 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 SFT2D3Q587I9 215 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 FAM111BQ6SJ93 734 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 ZNF621Q6ZSS3 439 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 CCDC121Q6ZUS5 278 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 OR7G2Q8NG99 324 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 DOK4Q8TEW6 326 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 PTPMT1Q8WUK0 201 aaPredicted RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 LRRC58Q96CX6 371 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 GPN2Q9H9Y4 310 aaPredicted RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 GID8Q9NWU2 228 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 VAPAQ9P0L0 249 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 C19orf25Q9UFG5 118 aaPredicted RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 IL17BQ9UHF5 180 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 SNX8Q9Y5X2 465 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 HS3ST3B1Q9Y662 390 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 LOC102723996A0A087X1L8 192 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 A8MUA0 341 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 B2RBV5 119 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 C17orf105B2RV13 164 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 SOAT1P35610 550 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 SSPNQ14714 243 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 TMEM64Q6YI46 380 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 CPEB2Q7Z5Q1 589 aaKnown RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 VWA5B2Q8N398 1253 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 TRIML2Q8N7C3 387 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 RBM15BQ8NDT2 890 aaKnown RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 KIAA1143Q96AT1 154 aaPredicted RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 C8orf44Q96CB5 159 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 FAM120BQ96EK7 910 aaKnown RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 CGREF1Q99674 301 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 SLC39A3Q9BRY0 314 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 ZNF639Q9UID6 485 aa17.06■□□□□ 0.32
RGP1-202ENST00000496906 MRPS18BQ9Y676 258 aaKnown RBP17.06■□□□□ 0.32
RGP1-202ENST00000496906 A0A087WV62 115 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 IGHV3-20A0A0C4DH32 117 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 PLOD3O60568 738 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 KRT16P08779 473 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 TNNI3P19429 210 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 UQCRC2P22695 453 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 CLN3Q13286 438 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 CAPRIN1Q14444 709 aaKnown RBP17.05■□□□□ 0.32
RGP1-202ENST00000496906 ZSCAN26Q16670 478 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 TRMT12Q53H54 448 aaKnown RBP17.05■□□□□ 0.32
RGP1-202ENST00000496906 FHL5Q5TD97 284 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 C6orf163Q5TEZ5 329 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 C8orf82Q6P1X6 216 aaPredicted RBP17.05■□□□□ 0.32
RGP1-202ENST00000496906 RINLQ6ZS11 566 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 ERMP1Q7Z2K6 904 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 CLEC4FQ8N1N0 589 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 OR2L13Q8N349 312 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms