RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 RPS27LQ71UM5 84 aaKnown RBP11.75□□□□□ -0.53
PTPRF-214ENST00000496043 TRILQ7L0X0 811 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 LCA5Q86VQ0 697 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 GALNT12Q8IXK2 581 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 CNPY4Q8N129 248 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 FAM13CQ8NE31 585 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 SPOCK3Q9BQ16 436 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 WWTR1Q9GZV5 400 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 BRF2Q9HAW0 419 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 SH2D2AQ9NP31 389 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 FARSBQ9NSD9 589 aaKnown RBP11.75□□□□□ -0.53
PTPRF-214ENST00000496043 TEX10Q9NXF1 929 aaPredicted RBP11.75□□□□□ -0.53
PTPRF-214ENST00000496043 TMEM216Q9P0N5 145 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 ACAD8Q9UKU7 415 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 PCDHA9Q9Y5H5 950 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 CENPEQ02224 2701 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 A0A1B0GTL3 188 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 C1orf226A1L170 272 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 C19orf84I3L1E1 186 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 TP53I11O14683 189 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 RIPK2O43353 540 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 HCN1O60741 890 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 SUPT7LO94864 414 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 OR4F21O95013 312 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 CPMP14384 443 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 TSPAN8P19075 237 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 IMPDH1P20839 514 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 NT5EP21589 574 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 GCAP28676 217 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 SSTR4P31391 388 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 MAN2A2P49641 1150 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 KCNJ2P63252 427 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 FUT7Q11130 342 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 UNC50Q53HI1 259 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 LETMD1Q6P1Q0 360 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF585AQ6P3V2 769 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 COMMD6Q7Z4G1 85 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 GDF7Q7Z4P5 450 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 FBXW8Q8N3Y1 598 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 OR7G1Q8NGA0 311 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 OR5M9Q8NGP3 310 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 LILRB4Q8NHJ6 448 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 SARAFQ96BY9 339 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 TM4SF18Q96CE8 201 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 SMC6Q96SB8 1091 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 OR10A5Q9H207 317 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 EXO5Q9H790 373 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 ZFP64Q9NPA5 681 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 VPS29Q9UBQ0 182 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 TRPS1Q9UHF7 1281 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 CES1P1Q9UKY3 287 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 BOKQ9UMX3 212 aaPredicted RBP11.74□□□□□ -0.53
PTPRF-214ENST00000496043 NPFFR2Q9Y5X5 522 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 ITPR2Q14571 2701 aa11.74□□□□□ -0.53
PTPRF-214ENST00000496043 TRGV5A0A0B4J1U4 118 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 A0A1W2PS29 197 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 ANKRD33BA6NCL7 494 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 GOLGA6L10A6NI86 522 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 MANBAO00462 879 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 AQP7O14520 342 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 DLX3O60479 287 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 KRT6AP02538 564 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 CLPSP04118 112 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 KRT6BP04259 564 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 HOXD4P09016 255 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-214ENST00000496043 CT62P0C5K7 136 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 CSNK2A2P19784 350 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-214ENST00000496043 ATP5F1P24539 256 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-214ENST00000496043 CHRNB4P30926 498 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 KRT6CP48668 564 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 NRG3P56975 720 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 TRA2BP62995 288 aaKnown RBP11.73□□□□□ -0.53
PTPRF-214ENST00000496043 GALNT1Q10472 559 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-214ENST00000496043 MAP4K2Q12851 820 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 SLC29A2Q14542 456 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 RASA2Q15283 850 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 NTRK2Q16620 822 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 TBCELQ5QJ74 424 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF678Q5SXM1 525 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 WLSQ5T9L3 541 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 PRAMEF20Q5VT98 475 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 TMEM198Q66K66 360 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 SLC48A1Q6P1K1 146 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 SLC22A9Q8IVM8 553 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 MARVELD2Q8N4S9 558 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF615Q8N8J6 731 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF441Q8N8Z8 693 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 OR10G3Q8NGC4 313 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 OR5M3Q8NGP4 307 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 OR10Q1Q8NGQ4 319 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 METTL6Q8TCB7 284 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 ACMSDQ8TDX5 336 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 FAIM2Q9BWQ8 316 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 PROK2Q9HC23 129 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 CELSR2Q9HCU4 2923 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 PNPLA3Q9NST1 481 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 QPCTLQ9NXS2 382 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 DCDC2Q9UHG0 476 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF225Q9UK10 706 aa11.73□□□□□ -0.53
PTPRF-214ENST00000496043 CNOT11Q9UKZ1 510 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms