RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ZNF354BQ96LW1 612 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 BBS4Q96RK4 519 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 LMF1Q96S06 567 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 REEP4Q9H6H4 257 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 EPS8L2Q9H6S3 715 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 ENTPD4Q9Y227 616 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 EIF3LQ9Y262 564 aaKnown RBP18.07■□□□□ 0.48
HDAC4-212ENST00000495497 CHD6Q8TD26 2715 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 BOD1L1Q8NFC6 3051 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 TRPC5OSA6NMA1 111 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 GABRR3A8MPY1 467 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 MYO1GB0I1T2 1018 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 SLCO1B7G3V0H7 640 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 DPM1O60762 260 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 ZFAND5O76080 213 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 ATP1B1P05026 303 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 LBPP18428 481 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 ASMTP46597 345 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 RNF4P78317 190 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 MRPS35P82673 323 aaKnown RBP18.06■□□□□ 0.48
HDAC4-212ENST00000495497 MAD2L1Q13257 205 aaPredicted RBP18.06■□□□□ 0.48
HDAC4-212ENST00000495497 MEP1AQ16819 746 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 PRICKLE4Q2TBC4 344 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 IGFL3Q6UXB1 125 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 HSDL2Q6YN16 418 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 C9orf40Q8IXQ3 194 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 ZADH2Q8N4Q0 377 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 KRTCAP2Q8N6L1 136 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 OR9A2Q8NGT5 310 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 SUN3Q8TAQ9 357 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 CIDECQ96AQ7 238 aaPredicted RBP18.06■□□□□ 0.48
HDAC4-212ENST00000495497 ART5Q96L15 291 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 SLAMF7Q9NQ25 335 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 GIMAP4Q9NUV9 329 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 ANKRD10Q9NXR5 420 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 MAT2BQ9NZL9 334 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 SH3BP4Q9P0V3 963 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 LUZP4Q9P127 313 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 COPS7AQ9UBW8 275 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 TEKT2Q9UIF3 430 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 USH1CQ9Y6N9 552 aa18.06■□□□□ 0.48
HDAC4-212ENST00000495497 DYNC1I1O14576 645 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 VPS4BO75351 444 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 PCSK2P16519 638 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 S1PR1P21453 382 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 NCBP2P52298 156 aaKnown RBP eCLIP18.05■□□□□ 0.48
HDAC4-212ENST00000495497 SLC37A1P57057 533 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 MLF1P58340 268 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 ARG2P78540 354 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 PDE7AQ13946 482 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 EXOSC7Q15024 291 aaKnown RBP18.05■□□□□ 0.48
HDAC4-212ENST00000495497 CEBPEQ15744 281 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 MPEG1Q2M385 716 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 SMU1Q2TAY7 513 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 TRMT12Q53H54 448 aaKnown RBP18.05■□□□□ 0.48
HDAC4-212ENST00000495497 NXNQ6DKJ4 435 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 ZNF843Q8N446 348 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 ARFGAP2Q8N6H7 521 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 TEX19Q8NA77 164 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 OR7A2PQ8NGA2 310 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 TM9SF4Q92544 642 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 KAT2AQ92830 837 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 PPCDCQ96CD2 204 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 GLIPR2Q9H4G4 154 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 ANKRA2Q9H9E1 313 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 ASIC5Q9NY37 505 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 TAS2R7Q9NYW3 318 aa18.05■□□□□ 0.48
HDAC4-212ENST00000495497 NOP53Q9NZM5 478 aaKnown RBP18.05■□□□□ 0.48
HDAC4-212ENST00000495497 SPENQ96T58 3664 aaKnown RBP18.04■□□□□ 0.48
HDAC4-212ENST00000495497 TCP11X1B4DZS4 312 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 WWP2O00308 870 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 SCAMP2O15127 329 aaKnown RBP18.04■□□□□ 0.48
HDAC4-212ENST00000495497 ALDOCP09972 364 aaKnown RBP18.04■□□□□ 0.48
HDAC4-212ENST00000495497 EFNA1P20827 205 aaPredicted RBP18.04■□□□□ 0.48
HDAC4-212ENST00000495497 FUT7Q11130 342 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 MAP4K2Q12851 820 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 KLRB1Q12918 225 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 DUSP8Q13202 625 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 ZNF628Q5EBL2 1059 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 C6orf163Q5TEZ5 329 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 ZNF468Q5VIY5 522 aaPredicted RBP18.04■□□□□ 0.48
HDAC4-212ENST00000495497 RNF111Q6ZNA4 994 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 VWA5B2Q8N398 1253 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 THOC1Q96FV9 657 aaKnown RBP18.04■□□□□ 0.48
HDAC4-212ENST00000495497 OR52B2Q96RD2 323 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 OR10A5Q9H207 317 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 ATP6V1HQ9UI12 483 aa18.04■□□□□ 0.48
HDAC4-212ENST00000495497 DYTNA2CJ06 578 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 PDPK1O15530 556 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 TBX19O60806 448 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 DIAPH2O60879 1101 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 ITGA10O75578 1167 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 NTSP30990 170 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 MPIP34949 423 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 HPCAL1P37235 193 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 NME5P56597 212 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 GUCY1A3Q02108 690 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 TUBA3CQ13748 450 aa18.03■□□□□ 0.48
HDAC4-212ENST00000495497 PLEKHN1Q494U1 663 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-212ENST00000495497 SLC6A19Q695T7 634 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms