RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TAGAPQ8N103 731 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 ZNF441Q8N8Z8 693 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 WDR20Q8TBZ3 569 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 ZNF597Q96LX8 424 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 RAB17Q9H0T7 212 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 DNAJB12Q9NXW2 375 aaKnown RBP20.28■□□□□ 0.84
HDDC3-203ENST00000494993 PSD3Q9NYI0 1048 aa20.28■□□□□ 0.84
HDDC3-203ENST00000494993 ZNF469Q96JG9 3925 aaPredicted RBP20.27■□□□□ 0.84
HDDC3-203ENST00000494993 HSPB2A8KAH6 182 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 TRIM3O75382 744 aaPredicted RBP20.27■□□□□ 0.84
HDDC3-203ENST00000494993 SLC35E2P0CK97 266 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 GDF1P27539 372 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 SSTR4P31391 388 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 IST1P53990 364 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 GUCY2DQ02846 1103 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 TRADDQ15628 312 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 HSPB2Q16082 182 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 TBCELQ5QJ74 424 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 MROH9Q5TGP6 573 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 TMEM198Q66K66 360 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 OR52E8Q6IFG1 317 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 NUDT13Q86X67 352 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 ZZZ3Q8IYH5 903 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 L3MBTL4Q8NA19 623 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 DIO2Q92813 273 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 UCN3Q969E3 161 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 IPPKQ9H8X2 491 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 SNX15Q9NRS6 342 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 RNF11Q9Y3C5 154 aa20.27■□□□□ 0.84
HDDC3-203ENST00000494993 ABCA4P78363 2273 aa20.27■□□□□ 0.83
HDDC3-203ENST00000494993 NF1P21359 2839 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 C2orf92A0A1B0GVN3 265 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 HMX2A2RU54 273 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 ANKRD33BA6NCL7 494 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 FOXE1O00358 373 aaPredicted RBP20.26■□□□□ 0.83
HDDC3-203ENST00000494993 TP53I11O14683 189 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 CTAG2O75638 210 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 PIK3CGP48736 1102 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 NEK2P51955 445 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 RPS6KA2Q15349 733 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 TMEM64Q6YI46 380 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 RELL2Q8NC24 303 aaPredicted RBP20.26■□□□□ 0.83
HDDC3-203ENST00000494993 TP53INP1Q96A56 240 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 CXorf21Q9HAI6 301 aa20.26■□□□□ 0.83
HDDC3-203ENST00000494993 TNPO3Q9Y5L0 923 aaKnown RBP20.26■□□□□ 0.83
HDDC3-203ENST00000494993 HRNRQ86YZ3 2850 aaPredicted RBP20.26■□□□□ 0.83
HDDC3-203ENST00000494993 MED12Q93074 2177 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 A0A096LPK6 155 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 C15orf38-AP3S2A0A0A6YYH1 394 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 A0A1W2PS29 197 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 CAPN14A8MX76 684 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 PGRMC2O15173 223 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 KLHL2O95198 593 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 SIX3O95343 332 aaPredicted RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 GBAP04062 536 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 PEX19P40855 299 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 KIR2DL3P43628 341 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 FBXW4P57775 412 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 CRYZQ08257 329 aaKnown RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 DUSP8Q13202 625 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 SNTB1Q13884 538 aaKnown RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 ACSF3Q4G176 576 aaPredicted RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 METTL2BQ6P1Q9 378 aaKnown RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 KLC3Q6P597 504 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 NINJ1Q92982 152 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 MRRFQ96E11 262 aaKnown RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 GPR78Q96P69 363 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 POLDIP3Q9BY77 421 aaKnown RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 TEX10Q9NXF1 929 aaPredicted RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 CPSF2Q9P2I0 782 aaKnown RBP20.25■□□□□ 0.83
HDDC3-203ENST00000494993 NPFFR2Q9Y5X5 522 aa20.25■□□□□ 0.83
HDDC3-203ENST00000494993 MAP1AP78559 2803 aaPredicted RBP20.24■□□□□ 0.83
HDDC3-203ENST00000494993 AHRRA9YTQ3 701 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 SYT5O00445 386 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 SEMA3DO95025 777 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 EPPINO95925 133 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 CT62P0C5K7 136 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 PIK3R1P27986 724 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 TMED10P49755 219 aaKnown RBP20.24■□□□□ 0.83
HDDC3-203ENST00000494993 FUT7Q11130 342 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 HLA-DQA1Q5Y7H0 255 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 BICRALQ6AI39 1079 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 GALNT12Q8IXK2 581 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 NAXEQ8NCW5 288 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 SPPL2AQ8TCT8 520 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 RILPQ96NA2 401 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 SERPINI1Q99574 410 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 GPATCH1Q9BRR8 931 aaKnown RBP20.24■□□□□ 0.83
HDDC3-203ENST00000494993 ZNF358Q9NW07 568 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 IKBKGQ9Y6K9 419 aa20.24■□□□□ 0.83
HDDC3-203ENST00000494993 KDM4EB2RXH2 506 aaPredicted RBP20.23■□□□□ 0.83
HDDC3-203ENST00000494993 DVL2O14641 736 aa20.23■□□□□ 0.83
HDDC3-203ENST00000494993 CLDN9O95484 217 aa20.23■□□□□ 0.83
HDDC3-203ENST00000494993 BMP5P22003 454 aa20.23■□□□□ 0.83
HDDC3-203ENST00000494993 UQCRC1P31930 480 aa20.23■□□□□ 0.83
HDDC3-203ENST00000494993 CEACAM8P31997 349 aaPredicted RBP20.23■□□□□ 0.83
HDDC3-203ENST00000494993 ASCL1P50553 236 aa20.23■□□□□ 0.83
HDDC3-203ENST00000494993 TECRLQ5HYJ1 363 aa20.23■□□□□ 0.83
HDDC3-203ENST00000494993 ZNF615Q8N8J6 731 aa20.23■□□□□ 0.83
HDDC3-203ENST00000494993 TNIP2Q8NFZ5 429 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms