RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 OR1E2P47887 323 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ARRB1P49407 418 aaPredicted RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 SHBQ15464 509 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 CTU2Q2VPK5 515 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 PRRT3Q5FWE3 981 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 C6orf141Q5SZD1 244 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 MRM1Q6IN84 353 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ZNF773Q6PK81 442 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 NRROSQ86YC3 692 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ATG16L2Q8NAA4 619 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 RHBDD1Q8TEB9 315 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 KLHDC7BQ96G42 594 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ZNF347Q96SE7 839 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 GLIPR2Q9H4G4 154 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 A4GALTQ9NPC4 353 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 SLC35C2Q9NQQ7 365 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 THSD1Q9NS62 852 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 KRT84Q9NSB2 600 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 APOBEC3BQ9UH17 382 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 RSL24D1Q9UHA3 163 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ARID1BQ8NFD5 2236 aaPredicted RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ZW10O43264 779 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 GUCY1B2O75343 617 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 PRKRAO75569 313 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 EEF1B2P24534 225 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 RYKP34925 604 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 RABIFP47224 123 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 CCT3P49368 545 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 RPS6KA3P51812 740 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 STXBP1P61764 594 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 KEAP1Q14145 624 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 INAVAQ3KP66 663 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ZBED5Q49AG3 693 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 FAHD1Q6P587 224 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 KCTD8Q6ZWB6 473 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ARMC8Q8IUR7 673 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 SMYD1Q8NB12 490 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 OR13H1Q8NG92 308 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 GEMIN6Q8WXD5 167 aaKnown RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 AMDHD1Q96NU7 426 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 ZNF300Q96RE9 604 aaPredicted RBP14.72□□□□□ -0.05
SHISA5-216ENST00000494854 VCX3AQ9NNX9 186 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 TESMINQ9Y4I5 508 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 LYVE1Q9Y5Y7 322 aa14.72□□□□□ -0.05
SHISA5-216ENST00000494854 SCN3AQ9NY46 2000 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 NINQ8N4C6 2090 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 A0A1W2PR48 441 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 PRAMEF25A6NGN4 478 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 C5orf58C9J3I9 102 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 TNFRSF11BO00300 401 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 TOR1BO14657 336 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 PRAMEF10O60809 474 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 BCHEP06276 602 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 CYP4B1P13584 511 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 ITGA2P17301 1181 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 CERS1P27544 350 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 NTSP30990 170 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 GPC1P35052 558 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 CLK3P49761 638 aaKnown RBP14.71□□□□□ -0.05
SHISA5-216ENST00000494854 SH3BGRP55822 239 aaPredicted RBP14.71□□□□□ -0.05
SHISA5-216ENST00000494854 RAB8AP61006 207 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 RPS15AP62244 130 aaKnown RBP14.71□□□□□ -0.05
SHISA5-216ENST00000494854 TP53BP2Q13625 1128 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 RAPSNQ13702 412 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 KIR2DS3Q14952 304 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 ABI3BPQ7Z7G0 1075 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 SETD9Q8NE22 299 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 FLVCR1-AS1Q8TAF5 88 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 SAP25Q8TEE9 199 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 SLC38A5Q8WUX1 472 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 ZFAND2BQ8WV99 257 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 POLR1BQ9H9Y6 1135 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 FBXW2Q9UKT8 454 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 ATG4BQ9Y4P1 393 aa14.71□□□□□ -0.05
SHISA5-216ENST00000494854 COL5A1P20908 1838 aaPredicted RBP14.71□□□□□ -0.06
SHISA5-216ENST00000494854 GLOD5A6NK44 160 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 WASHC1A8K0Z3 465 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 TNFP01375 233 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 TFPTP0C1Z6 253 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 NCBP2P52298 156 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHISA5-216ENST00000494854 GABARAPL2P60520 117 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 IL5RAQ01344 420 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 ILF3Q12906 894 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHISA5-216ENST00000494854 FOXC1Q12948 553 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 PMS2P3Q13401 168 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 LSAMPQ13449 338 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 TOP3AQ13472 1001 aaPredicted RBP14.7□□□□□ -0.06
SHISA5-216ENST00000494854 CYP27C1Q4G0S4 372 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 BROXQ5VW32 411 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 LAIR2Q6ISS4 152 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 ALDH16A1Q8IZ83 802 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 SLC22A18ASQ8N1D0 253 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 TTC29Q8NA56 475 aaPredicted RBP14.7□□□□□ -0.06
SHISA5-216ENST00000494854 FBLIM1Q8WUP2 373 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 RAB8BQ92930 207 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 TMEM19Q96HH6 336 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 BBS4Q96RK4 519 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 TWSG1Q9GZX9 223 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 SLC24A3Q9HC58 644 aa14.7□□□□□ -0.06
SHISA5-216ENST00000494854 BLOC1S6Q9UL45 172 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms