RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	FES	P07332	822 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	NR2F1	P10589	423 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	RHCE	P18577	417 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	MC3R	P41968	323 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CRISP3	P54108	245 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	NXPH1	P58417	271 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	LASP1	Q14847	261 aa	Known RBP	21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	SYPL1	Q16563	259 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ZNF605	Q86T29	641 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	SETD9	Q8NE22	299 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	PROX1	Q92786	737 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CCDC3	Q9BQI4	270 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	MRPS2	Q9Y399	296 aa	Known RBP	21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	GPC6	Q9Y625	555 aa	Predicted RBP	21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	HSPE1-MOB4	S4R3N1	261 aa		21.19	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	LILRA5	A6NI73	299 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397		A8MVJ9	347 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ASNA1	O43681	348 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	RECK	O95980	971 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ST6GAL1	P15907	406 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ELK4	P28324	431 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	PTGER1	P34995	402 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	POLR2I	P36954	125 aa	Known RBP	21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	KCNJ5	P48544	419 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	HMGA2	P52926	109 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CDH12	P55289	794 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ISL1	P61371	349 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CNPY1	Q3B7I2	92 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	PRAMEF8	Q5VWM4	474 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	PRAMEF7	Q5VXH5	474 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	USP53	Q70EK8	1073 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	LGI4	Q8N135	537 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	SDR16C5	Q8N3Y7	309 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	C19orf47	Q8N9M1	422 aa	Known RBP	21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	NUP43	Q8NFH3	380 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	GPR32P1	Q8NGA4	272 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	C1orf216	Q8TAB5	229 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	GUCD1	Q96NT3	240 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CSF3R	Q99062	836 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	NTM	Q9P121	344 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	THEG	Q9P2T0	379 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	SNRNP200	O75643	2136 aa	Known RBP	21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	GALR3	O60755	368 aa	Predicted RBP	21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	OR6B1	O95007	311 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CDH3	P22223	829 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CAPZB	P47756	277 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	XK	P51811	444 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CD47	Q08722	323 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	PUM1	Q14671	1186 aa	Known RBP eCLIP	21.18	■□□□□ 0.98	4e-7	■□□□□ 9.2
ARHGAP4-223	ENST00000494397	CYP27C1	Q4G0S4	372 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	RBM44	Q6ZP01	1051 aa	Known RBP	21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	C17orf82	Q86X59	251 aa	Predicted RBP	21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CHDH	Q8NE62	594 aa	Predicted RBP	21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	FBLIM1	Q8WUP2	373 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ZNF354B	Q96LW1	612 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	COL21A1	Q96P44	957 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	SPATA5L1	Q9BVQ7	753 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	RBM38	Q9H0Z9	239 aa	Known RBP	21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	SEC14L3	Q9UDX4	400 aa		21.18	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ANXA8	P13928	327 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	YAP1	P46937	504 aa	Known RBP	21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	LIMS1	P48059	325 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	VSX2	P58304	361 aa	Predicted RBP	21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	HNRNPK	P61978	463 aa	Known RBP eCLIP	21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	SIM1	P81133	766 aa	Predicted RBP	21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	IL1RL1	Q01638	556 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	TOP3A	Q13472	1001 aa	Predicted RBP	21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	MICA	Q29983	383 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	C6orf141	Q5SZD1	244 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	TTC29	Q8NA56	475 aa	Predicted RBP	21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	OR10G2	Q8NGC3	310 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	PSD2	Q9BQI7	771 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	BTBD2	Q9BX70	525 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	NPL	Q9BXD5	320 aa	Predicted RBP	21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	KCND3	Q9UK17	655 aa		21.17	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	STK25	O00506	426 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	AQP9	O43315	295 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ETS2	P15036	469 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	EXOC3L2	Q2M3D2	409 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	UBALD2	Q8IYN6	164 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	GABARAPL3	Q9BY60	117 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	FAM60A	Q9NP50	221 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	ACER3	Q9NUN7	267 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	BLOC1S6	Q9UL45	172 aa		21.16	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397		A0A0G2JPF8	293 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	HNRNPCL2	B2RXH8	293 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	HNRNPCL3	B7ZW38	293 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	LMO7DN	F2Z398	122 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397		J3KTA2	159 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	DNAJB6	O75190	326 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	PROS1	P07225	676 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	HNRNPCL4	P0DMR1	293 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CRHBP	P24387	322 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CXCL12	P48061	93 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	MAN2A2	P49641	1150 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	CLK3	P49761	638 aa	Known RBP	21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	OLR1	P78380	273 aa		21.15	■□□□□ 0.98
ARHGAP4-223	ENST00000494397	FUT5	Q11128	374 aa		21.15	■□□□□ 0.98

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