RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ARG2P78540 354 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 KLRB1Q12918 225 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 RGS9BPQ6ZS82 235 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 FAM47EQ6ZV65 393 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 LARP4Q71RC2 724 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRA2A-209ENST00000494255 SLC29A4Q7RTT9 530 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF321PQ8N8H1 164 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 OR5L2Q8NGL0 311 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF764Q96H86 408 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-209ENST00000494255 PRPF18Q99633 342 aaKnown RBP11.6□□□□□ -0.55
TRA2A-209ENST00000494255 ZBTB20Q9HC78 741 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF223Q9UK11 482 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-209ENST00000494255 EXO1Q9UQ84 846 aaKnown RBP11.6□□□□□ -0.55
TRA2A-209ENST00000494255 HEMK1Q9Y5R4 338 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-209ENST00000494255 CPAMD8Q8IZJ3 1885 aa11.6□□□□□ -0.55
TRA2A-209ENST00000494255 GOLGA8QA0A0J9YX86 632 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 GOLGA8OA6NCC3 632 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 OR6C76A6NM76 312 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 GABRR3A8MPY1 467 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 GOLGA8NF8WBI6 632 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 SCAMP2O15127 329 aaKnown RBP11.59□□□□□ -0.55
TRA2A-209ENST00000494255 IGKV3-11P04433 115 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 G6PDP11413 515 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 PCSK2P16519 638 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 PRPS1L1P21108 318 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 EPHA3P29320 983 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 NCBP2P52298 156 aaKnown RBP eCLIP11.59□□□□□ -0.554e-45■■■■■ 49.9
TRA2A-209ENST00000494255 MLF1P58340 268 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 RNF4P78317 190 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 DUSP2Q05923 314 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 FUT7Q11130 342 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 MAP4K2Q12851 820 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 PDE7AQ13946 482 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 PTGR1Q14914 329 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 LTB4RQ15722 352 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 PRICKLE4Q2TBC4 344 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 OGFOD2Q6N063 350 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 SPATA19Q7Z5L4 167 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 BEST3Q8N1M1 668 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 RBMXL3Q8N7X1 1067 aaKnown RBP11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ADCY4Q8NFM4 1077 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 OR7G1Q8NGA0 311 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ZFP28Q8NHY6 868 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 HAS2Q92819 552 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 MFRPQ9BY79 579 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 RNF32Q9H0A6 362 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 WDR55Q9H6Y2 383 aaPredicted RBP11.59□□□□□ -0.55
TRA2A-209ENST00000494255 MAT2BQ9NZL9 334 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ATP6V1HQ9UI12 483 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 HRKO00198 91 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 DIAPH2O60879 1101 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 TGDSO95455 350 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 WDPCPO95876 746 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 PRB1P04280 392 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 CT62P0C5K7 136 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 SSTR4P31391 388 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 SLC37A1P57057 533 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 CEBPEQ15744 281 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 HLA-DQA1Q5Y7H0 255 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ANKRD26P1Q6NSI1 321 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 FAM111BQ6SJ93 734 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ACAD11Q709F0 780 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ARMC10Q8N2F6 343 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 OR9A2Q8NGT5 310 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 SUN3Q8TAQ9 357 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ZNF675Q8TD23 568 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ACTRT2Q8TDY3 377 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ERP27Q96DN0 273 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ZBED6CLQ96FA7 236 aaPredicted RBP11.59□□□□□ -0.55
TRA2A-209ENST00000494255 NPAS2Q99743 824 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 UTP23Q9BRU9 249 aaKnown RBP11.59□□□□□ -0.55
TRA2A-209ENST00000494255 DPY30Q9C005 99 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ATAD3AQ9NVI7 634 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 PLA2G3Q9NZ20 509 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 BCAP29Q9UHQ4 241 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 ANAPC2Q9UJX6 822 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 B3GNT3Q9Y2A9 372 aa11.59□□□□□ -0.55
TRA2A-209ENST00000494255 YARS2Q9Y2Z4 477 aaKnown RBP11.59□□□□□ -0.55
TRA2A-209ENST00000494255 NBEAQ8NFP9 2946 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 FAM208BQ5VWN6 2430 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 OR5H15A6NDH6 313 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 TCP11X1B4DZS4 312 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 CDK2AP1O14519 115 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 PRKNO60260 465 aaPredicted RBP11.58□□□□□ -0.56
TRA2A-209ENST00000494255 BCAS2O75934 225 aaPredicted RBP11.58□□□□□ -0.56
TRA2A-209ENST00000494255 SLITRK5O94991 958 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 F10P00742 488 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 PTGER1P34995 402 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 SSR4P51571 173 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 DIO3P55073 304 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 CLDN8P56748 225 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 OC90Q02509 493 aaPredicted RBP11.58□□□□□ -0.56
TRA2A-209ENST00000494255 PRSS53Q2L4Q9 553 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 NADK2Q4G0N4 442 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 SLC9B1Q4ZJI4 515 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 ZNF385BQ569K4 471 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 CPTPQ5TA50 214 aa11.58□□□□□ -0.56
TRA2A-209ENST00000494255 SLC6A19Q695T7 634 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms