RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 TRBV23-1A0A0A0MS06 115 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 TEX13CA0A0J9YWL9 993 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 A0A1B0GVT2 93 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 LNP1A1A4G5 178 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 B4E171 279 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 ANKRD66B4E2M5 251 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 PGRMC2O15173 223 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 TO15178 435 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 NOBOXO60393 691 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 LRP3O75074 770 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 SERPINA6P08185 405 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 ETS1P14921 441 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 CD38P28907 300 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 RORAP35398 523 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 CHRNA4P43681 627 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 ATXN3P54252 364 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-222ENST00000493919 ARSFP54793 590 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 OLIG2Q13516 323 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 CSRP2Q16527 193 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 Q5BKY6 102 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 OR2B11Q5JQS5 317 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 TRABD2AQ86V40 505 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 PRSS58Q8IYP2 241 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 UBQLNLQ8IYU4 475 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 C1orf216Q8TAB5 229 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 SFT2D1Q8WV19 159 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 TADA1Q96BN2 335 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 ZNF514Q96K75 400 aaPredicted RBP11.02□□□□□ -0.65
BRCA1-222ENST00000493919 MRGPRX2Q96LB1 330 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 HDHD2Q9H0R4 259 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 PLSCR3Q9NRY6 295 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 RXFP3Q9NSD7 469 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 RYDENQ9NUL5 291 aaKnown RBP11.02□□□□□ -0.65
BRCA1-222ENST00000493919 ADAMTS6Q9UKP5 1117 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 SHOC2Q9UQ13 582 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 ACTL7BQ9Y614 415 aa11.02□□□□□ -0.65
BRCA1-222ENST00000493919 GSAPA4D1B5 854 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CCDC182A6NF36 153 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 C10orf142B7Z368 130 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 DFNA5O60443 496 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 RECQL5O94762 991 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 KCNK2O95069 426 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 METTL18O95568 372 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 TOP3BO95985 862 aaKnown RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 PCCBP05166 539 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 JUNP05412 331 aaKnown RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ANXA5P08758 320 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ENGP17813 658 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 XRCC1P18887 633 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 FEN1P39748 380 aaKnown RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 PRKAA2P54646 552 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 HERVK_113P63132 956 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CHIT1Q13231 466 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 KIF19Q2TAC6 998 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ACER2Q5QJU3 275 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 HEPHL1Q6MZM0 1159 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 C1orf94Q6P1W5 598 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 SLC23A3Q6PIS1 610 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 GALNT10Q86SR1 603 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CCDC103Q8IW40 242 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 SVOPLQ8N434 492 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ZNF561Q8N587 486 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 TMEM145Q8NBT3 493 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CA5BP1Q8WTZ4 195 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 TMCO6Q96DC7 493 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 RTP4Q96DX8 246 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 C1QTNF2Q9BXJ5 285 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 UCK2Q9BZX2 261 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CCDC90BQ9GZT6 254 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 AAR2Q9Y312 384 aaKnown RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 PUS1Q9Y606 427 aaKnown RBP eCLIP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 PTPRZ1P23471 2315 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 A0A1W2PN81 502 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 MPTX1A8MV57 137 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CD3EAPO15446 510 aaKnown RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 PSMD3O43242 534 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 HSPA12AO43301 675 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 TSPAN2O60636 221 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 STX11O75558 287 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ZFPL1O95159 310 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 WNT1P04628 370 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ZSCAN5DPP0CG00 497 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CKMT1AP12532 417 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 RNH1P13489 461 aaKnown RBP11.01□□□□□ -0.65
BRCA1-222ENST00000493919 IGFALSP35858 605 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CHRNA7P36544 502 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 PPP5CP53041 499 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ERVK-25P63136 954 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 IFITM3Q01628 133 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 LRRC14Q15048 493 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 GPAT3Q53EU6 434 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 PABPC1L2AQ5JQF8 200 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 SIRPB2Q5JXA9 342 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 TIGD3Q6B0B8 471 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CYB5R2Q6BCY4 276 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 GCNT7Q6ZNI0 430 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 OVCH2Q7RTZ1 564 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 SETD9Q8NE22 299 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 OR2I1PQ8NGU4 316 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 DEDD2Q8WXF8 326 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms