RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 AGAP7PQ5VUJ5 663 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 AGAP6Q5VW22 663 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 NAPRTQ6XQN6 538 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 USP51Q70EK9 711 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF572Q7Z3I7 529 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 KLBQ86Z14 1044 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 OR1J4Q8NGS1 313 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 OR8K5Q8NH50 307 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SETD7Q8WTS6 366 aaKnown RBP7.54□□□□□ -1.2
BRCA1-221ENST00000493795 RSC1A1Q92681 617 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 SGTBQ96EQ0 304 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 AGAP4Q96P64 663 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 UHRF2Q96PU4 802 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 AGXT2Q9BYV1 514 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 CERS4Q9HA82 394 aa7.54□□□□□ -1.2
BRCA1-221ENST00000493795 TCRBV7S2A1N4TA0A589 114 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SOCS2O14508 198 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 HTRA2O43464 458 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SCO2O43819 266 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SLC22A5O76082 557 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SIX3O95343 332 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 RETP07949 1114 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ADORA3P0DMS8 318 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 MGST1P10620 155 aaKnown RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 CREB1P16220 341 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 PTNP21246 168 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 CLCN2P51788 898 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ARSFP54793 590 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 DAOAP59103 153 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 METTL11BQ5VVY1 283 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 NAA40Q86UY6 237 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF440Q8IYI8 595 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ARNTL2Q8WYA1 636 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 PTERQ96BW5 349 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SHDQ96IW2 340 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 TSGA13Q96PP4 275 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 HAPLN3Q96S86 360 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 REEP4Q9H6H4 257 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 CDH20Q9HBT6 801 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SRA1Q9HD15 236 aaKnown RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 STXBP5LQ9Y2K9 1186 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 NCOA3Q9Y6Q9 1424 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 POP7O75817 140 aaKnown RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SNRNP70P08621 437 aaKnown RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 KITLGP21583 273 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 CD9P21926 228 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 PYCR1P32322 319 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 GABRA3P34903 492 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 PTGIRP43119 386 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SLAMF1Q13291 335 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 RAB30Q15771 203 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 C4orf17Q53FE4 359 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 WDR45BQ5MNZ6 344 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 HIST2H3PS2Q5TEC6 136 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 RAET1LQ5VY80 246 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 PNCKQ6P2M8 343 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 BRICD5Q6PL45 260 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 TPRA1Q86W33 373 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 DCUN1D3Q8IWE4 304 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 CNIH3Q8TBE1 160 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ST7LQ8TDW4 575 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 OR5P2Q8WZ92 322 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 RSPRY1Q96DX4 576 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF559Q9BR84 538 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 DPEP3Q9H4B8 488 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 C2orf42Q9NWW7 574 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 TULP4Q9NRJ4 1543 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 CCDC85CA6NKD9 419 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 C2CD4BA6NLJ0 364 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 RTCAO00442 366 aaKnown RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 AGPAT2O15120 278 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ARPC5O15511 151 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ALDOBP05062 364 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SLC2A1P11166 492 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ADH5P11766 374 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 GRPRP30550 384 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SNRPD2P62316 118 aaKnown RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 KCNJ11Q14654 390 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 RAB35Q15286 201 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 UGCGQ16739 394 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 DUSP7Q16829 419 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ESCO2Q56NI9 601 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 KIAA0895LQ68EN5 471 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 EPGNQ6UW88 154 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF705AQ6ZN79 300 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 MMAAQ8IVH4 418 aaKnown RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 ZNF679Q8IYX0 411 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 MS4A15Q8N5U1 240 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 KREMEN2Q8NCW0 462 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 CHDHQ8NE62 594 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 OR9A1PQ8NGU1 263 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 FNDC9Q8TBE3 224 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 SORCS1Q8WY21 1168 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 TFGQ92734 400 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 DERL2Q9GZP9 239 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 OSBPL2Q9H1P3 480 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 TXNL4BQ9NX01 149 aaKnown RBP7.53□□□□□ -1.2
BRCA1-221ENST00000493795 NUBP2Q9Y5Y2 271 aa7.53□□□□□ -1.2
BRCA1-221ENST00000493795 CFAP20Q9Y6A4 193 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms