RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 DEFB118Q96PH6 123 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 PSMB7Q99436 277 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 COQ7Q99807 217 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 HSD17B14Q9BPX1 270 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 SPXQ9BT56 116 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 DCTN5Q9BTE1 182 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 CCDC28BQ9BUN5 200 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.22□□□□□ -1.89
CLK1-213ENST00000492793 TRIM10Q9UDY6 481 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 KCNN3Q9UGI6 736 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 CCPG1Q9ULG6 757 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 PLA2G4CQ9UP65 541 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 NUDCQ9Y266 331 aa3.22□□□□□ -1.89
CLK1-213ENST00000492793 A0A0U1RRA0 63 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 RNF103-CHMP3A0A140T963 221 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 ACOD1A6NK06 481 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 RPL37AP8A6NKH3 93 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 KRTAP16-1A8MUX0 517 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 K7EQG2 157 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 GALR3O60755 368 aaPredicted RBP3.21□□□□□ -1.9
CLK1-213ENST00000492793 CRLF1O75462 422 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 MT-ATP6P00846 226 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 FCER2P06734 321 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 PGK2P07205 417 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 APRTP07741 180 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 FCGR3AP08637 254 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 KRT5P13647 590 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 GAP43P17677 238 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 TMOD1P28289 359 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 RAG2P55895 527 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 CRMP1Q14194 572 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 CLPPQ16740 277 aaPredicted RBP3.21□□□□□ -1.9
CLK1-213ENST00000492793 MFSD7Q6UXD7 560 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 TMUB2Q71RG4 321 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 SLC47A2Q86VL8 602 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 CCDC71Q8IV32 467 aaPredicted RBP3.21□□□□□ -1.9
CLK1-213ENST00000492793 PYROXD2Q8N2H3 581 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 LRRC17Q8N6Y2 441 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 C4orf32Q8N8J7 132 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 TMEM37Q8WXS4 190 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 PHYHIPQ92561 330 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 TOMM40LQ969M1 308 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 RAB11FIP5Q9BXF6 653 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 PUS3Q9BZE2 481 aaKnown RBP3.21□□□□□ -1.9
CLK1-213ENST00000492793 SIRPDQ9H106 197 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 IL1RL2Q9HB29 575 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 CLIP2Q9UDT6 1046 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 HOOK1Q9UJC3 728 aaKnown RBP3.21□□□□□ -1.9
CLK1-213ENST00000492793 KLK13Q9UKR3 277 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 IKZF3Q9UKT9 509 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 DNPEPQ9ULA0 475 aa3.21□□□□□ -1.9
CLK1-213ENST00000492793 SNED1Q8TER0 1413 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 BCLAF3A2AJT9 711 aaKnown RBP3.2□□□□□ -1.9
CLK1-213ENST00000492793 RNF212BA8MTL3 300 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 LRRTM2O43300 516 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 TSPAN2O60636 221 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 LRP3O75074 770 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 ETS1P14921 441 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 FCARP24071 287 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 SHC1P29353 583 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 MATKP42679 507 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 NPY2RP49146 381 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 RGS19P49795 217 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 GSK3BP49841 420 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 CCL11P51671 97 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 NOP14P78316 857 aaKnown RBP3.2□□□□□ -1.9
CLK1-213ENST00000492793 COX10Q12887 443 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 HKDC1Q2TB90 917 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 C9orf66Q5T8R8 295 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 LEMD1Q68G75 181 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 REP15Q6BDI9 236 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 FBXL22Q6P050 247 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 ARMCX5Q6P1M9 558 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 CNSTQ6PJW8 725 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 ABRAXAS1Q6UWZ7 409 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 APOOLQ6UXV4 268 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 LMNTD2Q8IXW0 634 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 ZNRF1Q8ND25 227 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 MAPK1IP1LQ8NDC0 245 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 OR8H1Q8NGG4 311 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 OR4F5Q8NH21 305 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 TMEM45BQ96B21 275 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 NLNQ9BYT8 704 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 TRIM6Q9C030 488 aaPredicted RBP3.2□□□□□ -1.9
CLK1-213ENST00000492793 SPASTQ9UBP0 616 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 HCFC1P51610 2035 aa3.2□□□□□ -1.9
CLK1-213ENST00000492793 A0A0J9YVX5 310 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 TMEM89A2RUT3 159 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 EI24O14681 340 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 MCF2LO15068 1137 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 TXNL1O43396 289 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 HPP00738 406 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 HOXD4P09016 255 aaPredicted RBP3.19□□□□□ -1.9
CLK1-213ENST00000492793 FOSL2P15408 326 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 MAPK3P27361 379 aaPredicted RBP3.19□□□□□ -1.9
CLK1-213ENST00000492793 PRDX6P30041 224 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 AKT2P31751 481 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 TRIM23P36406 574 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 NDST1P52848 882 aa3.19□□□□□ -1.9
CLK1-213ENST00000492793 SLC8A3P57103 927 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms