RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 ASNA1O43681 348 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 SPAG7O75391 227 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 IL3P08700 152 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 NT5EP21589 574 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 FEN1P39748 380 aaKnown RBP22.81■■□□□ 1.24
UPF3A-209ENST00000492270 TRA2BP62995 288 aaKnown RBP22.81■■□□□ 1.24
UPF3A-209ENST00000492270 OPN5Q6U736 354 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 LYPD8Q6UX82 237 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 RTL4Q6ZR62 310 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 SLC29A4Q7RTT9 530 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 POGLUT1Q8NBL1 392 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 KLHL29Q96CT2 875 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 SLC17A7Q9P2U7 560 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 ZNF407Q9C0G0 2248 aa22.81■■□□□ 1.24
UPF3A-209ENST00000492270 SERTM1A2A2V5 107 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 CCDC151A5D8V7 595 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 TFECO14948 347 aaPredicted RBP22.8■■□□□ 1.24
UPF3A-209ENST00000492270 SLC19A2O60779 497 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 CLDN1O95832 211 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 CCL3P10147 92 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 PORP16435 677 aaPredicted RBP22.8■■□□□ 1.24
UPF3A-209ENST00000492270 TIA1P31483 386 aaKnown RBP eCLIP22.8■■□□□ 1.24
UPF3A-209ENST00000492270 DEKP35659 375 aaKnown RBP22.8■■□□□ 1.24
UPF3A-209ENST00000492270 NAA20P61599 178 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 RBPJQ06330 500 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 ACSM2AQ08AH3 577 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 KRTCAP3Q53RY4 240 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 SPIN4Q56A73 249 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 ACSM2BQ68CK6 577 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 ZFP62Q8NB50 900 aaPredicted RBP22.8■■□□□ 1.24
UPF3A-209ENST00000492270 RELTQ969Z4 430 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 C11orf24Q96F05 449 aaPredicted RBP22.8■■□□□ 1.24
UPF3A-209ENST00000492270 GATA5Q9BWX5 397 aaPredicted RBP22.8■■□□□ 1.24
UPF3A-209ENST00000492270 IQCGQ9H095 443 aaKnown RBP22.8■■□□□ 1.24
UPF3A-209ENST00000492270 MID2Q9UJV3 735 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 DLGAP4Q9Y2H0 992 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 NINQ8N4C6 2090 aa22.8■■□□□ 1.24
UPF3A-209ENST00000492270 A0A1B0GUH1 482 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 GNG14A0A1W2PPG7 69 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 HS6ST1O60243 411 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 ZG16O60844 167 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 CREB1P16220 341 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 NR0B1P51843 470 aaKnown RBP22.79■■□□□ 1.24
UPF3A-209ENST00000492270 FUT7Q11130 342 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 ZNF791Q3KP31 576 aaPredicted RBP22.79■■□□□ 1.24
UPF3A-209ENST00000492270 CLEC6AQ6EIG7 209 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 FAM111BQ6SJ93 734 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 CHERPQ8IWX8 916 aaKnown RBP22.79■■□□□ 1.24
UPF3A-209ENST00000492270 MREGQ8N565 214 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 OR2M7Q8NG81 312 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 C16orf52Q8NHV5 167 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 SLC22A8Q8TCC7 542 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 CNRIP1Q96F85 164 aaPredicted RBP22.79■■□□□ 1.24
UPF3A-209ENST00000492270 FAM111AQ96PZ2 611 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 MECRQ9BV79 373 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 FAIM2Q9BWQ8 316 aa22.79■■□□□ 1.24
UPF3A-209ENST00000492270 ROPN1BQ9BZX4 212 aaPredicted RBP22.79■■□□□ 1.24
UPF3A-209ENST00000492270 ROPN1Q9HAT0 212 aaPredicted RBP22.79■■□□□ 1.24
UPF3A-209ENST00000492270 GOLGA6L10A6NI86 522 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 OR6C76A6NM76 312 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 CRCPO75575 148 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 SOX18P35713 384 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 CA7P43166 264 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 PER3P56645 1201 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 MGAT2Q10469 447 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 C3AR1Q16581 482 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 PRICKLE4Q2TBC4 344 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 SPDYAQ5MJ70 313 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 FGD2Q7Z6J4 655 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 GHDCQ8N2G8 530 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 ZNF615Q8N8J6 731 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 ZNF441Q8N8Z8 693 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 GOLM1Q8NBJ4 401 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 ADCY4Q8NFM4 1077 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 C16orf78Q8WTQ4 265 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 MAGED4Q96JG8 741 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 BRINP2Q9C0B6 783 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 OR10A5Q9H207 317 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 MAT2BQ9NZL9 334 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 TINAGQ9UJW2 476 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 DTX4Q9Y2E6 619 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 ZNF835Q9Y2P0 537 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 PTGDR2Q9Y5Y4 395 aa22.78■■□□□ 1.24
UPF3A-209ENST00000492270 DNAJC13O75165 2243 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 NCOA6Q14686 2063 aaPredicted RBP22.77■■□□□ 1.24
UPF3A-209ENST00000492270 C2orf92A0A1B0GVN3 265 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 ATP1B1P05026 303 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 CSNK2A2P19784 350 aaPredicted RBP22.77■■□□□ 1.24
UPF3A-209ENST00000492270 S1PR1P21453 382 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 ALDH3A1P30838 453 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 DNASE1L1P49184 302 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 LTB4RQ15722 352 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 IMPG1Q17R60 797 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 CMPK2Q5EBM0 449 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 C6orf163Q5TEZ5 329 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 GALNT18Q6P9A2 607 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 TMEM64Q6YI46 380 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 VWA5B2Q8N398 1253 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 SIMC1Q8NDZ2 872 aa22.77■■□□□ 1.24
UPF3A-209ENST00000492270 OR52N2Q8NGI0 321 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms