RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 MIEF1Q9NQG6 463 aa15.12■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 GIMAP4Q9NUV9 329 aa15.12■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MYOTQ9UBF9 498 aa15.12■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 GIMAP2Q9UG22 337 aa15.12■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 YARS2Q9Y2Z4 477 aaKnown RBP15.12■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ATP6AP2A0A1C7CYW4 349 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 OR6C76A6NM76 312 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 PRAMEF2O60811 474 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 PEX11AO75192 247 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ATP6AP2O75787 350 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MAPK1P28482 360 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SSR4P51571 173 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SLC37A1P57057 533 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 OR1C1Q15619 314 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 INPP5JQ15735 1006 aaPredicted RBP15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 PRICKLE4Q2TBC4 344 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 PRR30Q53SZ7 412 aaPredicted RBP15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ZNF468Q5VIY5 522 aaPredicted RBP15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SLC29A4Q7RTT9 530 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 TICAM1Q8IUC6 712 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 VWA5B2Q8N398 1253 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 TMEM156Q8N614 296 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 HORMAD2Q8N7B1 307 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MDS2Q8NDY4 140 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 NUBPLQ8TB37 319 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 TUBGCP3Q96CW5 907 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 EGLN2Q96KS0 407 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 TSSK3Q96PN8 268 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SIGLEC12Q96PQ1 595 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 BRINP2Q9C0B6 783 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SLC35C2Q9NQQ7 365 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 THAP1Q9NVV9 213 aa15.11■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 WWP2O00308 870 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SNNO75324 88 aaPredicted RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 OR2J2O76002 312 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 CLPSP04118 112 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 JUNP05412 331 aaKnown RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 BCKDHAP12694 445 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SSTR4P31391 388 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 PTGER1P34995 402 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 CYB561P49447 251 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 HLCSP50747 726 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 FUT7Q11130 342 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MAP4K2Q12851 820 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 EBPQ15125 230 aaKnown RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 LTB4RQ15722 352 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 INAQ16352 499 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ZNF766Q5HY98 468 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 C6orf136Q5SQH8 315 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 RPUSD3Q6P087 351 aaKnown RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 C16orf47Q6ZP98 133 aaPredicted RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 CCDC116Q8IYX3 515 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 CISD2Q8N5K1 135 aaKnown RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 OR7G1Q8NGA0 311 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SNRNP40Q96DI7 357 aaKnown RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ACBD3Q9H3P7 528 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MANSC1Q9H8J5 431 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 TRIM45Q9H8W5 580 aaPredicted RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 PNPOQ9NVS9 261 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MAT2BQ9NZL9 334 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 LRFN1Q9P244 771 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MAP10Q9P2G4 905 aa15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 EXO1Q9UQ84 846 aaKnown RBP15.1■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 UQCRHLA0A096LP55 91 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 J3QKU1 62 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 NEURL1O76050 574 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 CD46P15529 392 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 NTSP30990 170 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ASMTP46597 345 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MGAT2Q10469 447 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 CEBPEQ15744 281 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SPINK14Q6IE38 97 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 FAM111BQ6SJ93 734 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 GPALPP1Q8IXQ4 340 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 FAM9CQ8IZT9 166 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 LIX1Q8N485 282 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ZNF615Q8N8J6 731 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 FNDC5Q8NAU1 212 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ADCY4Q8NFM4 1077 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 CLHC1Q8NHS4 586 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ZNF675Q8TD23 568 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ASB15Q8WXK1 588 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 GFM2Q969S9 779 aaKnown RBP15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 MIB2Q96AX9 1013 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 PPP1R36Q96LQ0 422 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 C5orf34Q96MH7 638 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 BBS4Q96RK4 519 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 GAL3ST4Q96RP7 486 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 RASL10BQ96S79 203 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 C1orf50Q9BV19 199 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 WWTR1Q9GZV5 400 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 OR10A5Q9H207 317 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 TAS2R7Q9NYW3 318 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 BAIAP2L1Q9UHR4 511 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 ZNF639Q9UID6 485 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 PCDHGB6Q9Y5F9 930 aa15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 COPG1Q9Y678 874 aaKnown RBP15.09■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 SPTA1P02549 2419 aa15.08■□□□□ 0.01
MSH5-SAPCD1-206ENST00000491552 CFAP46Q8IYW2 2715 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 A8MVJ9 347 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms