RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RPRMLQ8N4K4 120 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 LRRN4CLQ8ND94 238 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 OR4K14Q8NGD5 310 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 SDCCAG3Q96C92 435 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 TM4SF18Q96CE8 201 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 HBEGFQ99075 208 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 BRF2Q9HAW0 419 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 TRPS1Q9UHF7 1281 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 SNX6Q9UNH7 406 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 PCDHA9Q9Y5H5 950 aa16.59■□□□□ 0.25
HMGN1-219ENST00000491183 NCKAP5O14513 1909 aa16.58■□□□□ 0.25
HMGN1-219ENST00000491183 NINQ8N4C6 2090 aa16.58■□□□□ 0.25
HMGN1-219ENST00000491183 A0A1B0GVC2 190 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 NPIPA2E9PIF3 369 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 NPIPA3F8WFD2 350 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 GOLGA8RI6L899 631 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 SUPT7LO94864 414 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 FBXO45P0C2W1 286 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 MAPK12P53778 367 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 FUT7Q11130 342 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 GXYLT1Q4G148 440 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 TMEM64Q6YI46 380 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 TRILQ7L0X0 811 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 FAM109AQ8N4B1 249 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 ZNF615Q8N8J6 731 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 ZNF441Q8N8Z8 693 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 OR10G3Q8NGC4 313 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 MZB1Q8WU39 189 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 TMEM237Q96Q45 408 aa16.58■□□□□ 0.24
HMGN1-219ENST00000491183 TP63Q9H3D4 680 aaPredicted RBP16.58■□□□□ 0.24
HMGN1-219ENST00000491183 CHCHD2Q9Y6H1 151 aaPredicted RBP16.58■□□□□ 0.24
HMGN1-219ENST00000491183 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.58■□□□□ 0.24
HMGN1-219ENST00000491183 PKDREJQ9NTG1 2253 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 PHF3Q92576 2039 aaKnown RBP16.57■□□□□ 0.24
HMGN1-219ENST00000491183 C2orf92A0A1B0GVN3 265 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 ATP6AP2A0A1C7CYW4 349 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 MANBAO00462 879 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 ATP6AP2O75787 350 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 RFPL3SP0C7P2 107 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 CPMP14384 443 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 COX6B1P14854 86 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 CHN1P15882 459 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 TAC1P20366 129 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 IMPDH1P20839 514 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 S1PR1P21453 382 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 SLC10A1Q14973 349 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 PRAMEF20Q5VT98 475 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 SLC48A1Q6P1K1 146 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 LCA5Q86VQ0 697 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 GALNT12Q8IXK2 581 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 FBXW8Q8N3Y1 598 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 CDYL2Q8N8U2 506 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 FAM13CQ8NE31 585 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 ADIPOR1Q96A54 375 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 TP53INP1Q96A56 240 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 RUBCNLQ9H714 662 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 PNPLA3Q9NST1 481 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 CNIH4Q9P003 139 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 FETUBQ9UGM5 382 aa16.57■□□□□ 0.24
HMGN1-219ENST00000491183 CNOT11Q9UKZ1 510 aaKnown RBP16.57■□□□□ 0.24
HMGN1-219ENST00000491183 C1orf226A1L170 272 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 LRATO95237 230 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 PYGBP11216 843 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 PORP16435 677 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-219ENST00000491183 NT5EP21589 574 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 ATP5F1P24539 256 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-219ENST00000491183 TNFRSF8P28908 595 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 SERPINB3P29508 390 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 PTGER4P35408 488 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 SOX18P35713 384 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 PRKAA2P54646 552 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 MGAT2Q10469 447 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 NTRK2Q16620 822 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 TMEM211Q6ICI0 200 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 FAM111BQ6SJ93 734 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 GSPT2Q8IYD1 628 aaKnown RBP16.56■□□□□ 0.24
HMGN1-219ENST00000491183 DND1Q8IYX4 353 aaKnown RBP16.56■□□□□ 0.24
HMGN1-219ENST00000491183 ZNF295-AS1Q8N0V1 137 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 C1orf52Q8N6N3 182 aaKnown RBP16.56■□□□□ 0.24
HMGN1-219ENST00000491183 OR5M9Q8NGP3 310 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 OR5M3Q8NGP4 307 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 ACMSDQ8TDX5 336 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 CHTF18Q8WVB6 975 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 SMC6Q96SB8 1091 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 ZNF382Q96SR6 550 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 OR10A5Q9H207 317 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 RYDENQ9NUL5 291 aaKnown RBP16.56■□□□□ 0.24
HMGN1-219ENST00000491183 COQ3Q9NZJ6 369 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 TNFRSF10DQ9UBN6 386 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 VPS29Q9UBQ0 182 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 CREBBPQ92793 2442 aa16.56■□□□□ 0.24
HMGN1-219ENST00000491183 A0A1W2PPM1 405 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 OR14I1A6ND48 311 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 LRRC3CA6NJW4 275 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 FOXO6A8MYZ6 492 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 AQP7O14520 342 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 SUSD5O60279 629 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 GUCY1B2O75343 617 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 FEN1P39748 380 aaKnown RBP16.55■□□□□ 0.24
HMGN1-219ENST00000491183 KCNJ2P63252 427 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms