RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RGS10O43665 173 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 SH3BP5O60239 455 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 MRPS14O60783 128 aaKnown RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 MT-ND2P03891 347 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 HOXB3P14651 431 aaPredicted RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 PSMB9P28065 219 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 GRK6P43250 576 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 ST13P50502 369 aaKnown RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 MVKQ03426 396 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 DOC2AQ14183 400 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 MAD2L1BPQ15013 274 aaPredicted RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 ADNP2Q6IQ32 1131 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 ATG16L2Q8NAA4 619 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 ZNF740Q8NDX6 193 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 OR8J2Q8NGG1 315 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 SETD7Q8WTS6 366 aaKnown RBP21.53■■□□□ 1.04
USF3-203ENST00000491165 ALPK1Q96QP1 1244 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 REEP1Q9H902 201 aa21.53■■□□□ 1.04
USF3-203ENST00000491165 H7BY64 318 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 PRAMEF10O60809 474 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 SCN2BO60939 215 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 FAM20BO75063 409 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 PROS1P07225 676 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 CKMT1AP12532 417 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 MASP1P48740 699 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 GFERP55789 205 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 ITGA1P56199 1179 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 ZNF33BQ06732 778 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 XKR6Q5GH73 641 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 GPR155Q7Z3F1 870 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 OOSP2Q86WS3 158 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 RHBDD1Q8TEB9 315 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 PRAP1Q96NZ9 151 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 KLHL25Q9H0H3 589 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 ABCG4Q9H172 646 aa21.52■■□□□ 1.04
USF3-203ENST00000491165 FLRT2O43155 660 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 UGDHO60701 494 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 NADKO95544 446 aaPredicted RBP21.52■■□□□ 1.03
USF3-203ENST00000491165 CPSF4O95639 269 aaKnown RBP21.52■■□□□ 1.03
USF3-203ENST00000491165 FADS2O95864 444 aaKnown RBP21.52■■□□□ 1.03
USF3-203ENST00000491165 CSF2RBP32927 897 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 IRF8Q02556 426 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 NHLH1Q02575 133 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 E2F2Q14209 437 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 KIR2DS3Q14952 304 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 SUZ12Q15022 739 aaKnown RBP21.52■■□□□ 1.03
USF3-203ENST00000491165 OXA1LQ15070 435 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 AMZ1Q400G9 498 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 LIPJQ5W064 366 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 ZNF300Q96RE9 604 aaPredicted RBP21.52■■□□□ 1.03
USF3-203ENST00000491165 DPH2Q9BQC3 489 aaPredicted RBP21.52■■□□□ 1.03
USF3-203ENST00000491165 MROQ9BYG7 248 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 ARMC7Q9H6L4 198 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 SYNPO2LQ9H987 977 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 THUMPD1Q9NXG2 353 aaKnown RBP21.52■■□□□ 1.03
USF3-203ENST00000491165 VPS29Q9UBQ0 182 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 HCN4Q9Y3Q4 1203 aa21.52■■□□□ 1.03
USF3-203ENST00000491165 PVRP15151 417 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 LSM3P62310 102 aaKnown RBP21.51■■□□□ 1.03
USF3-203ENST00000491165 DGCR6Q14129 220 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 TMPRSS9Q7Z410 1059 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 ADCK1Q86TW2 530 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 C17orf64Q86WR6 236 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 CLECL1Q8IZS7 167 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 ZFP90Q8TF47 636 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 NEURL2Q9BR09 285 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 ACOT13Q9NPJ3 140 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 DYRK1BQ9Y463 629 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 FAM186AA6NE01 2351 aa21.51■■□□□ 1.03
USF3-203ENST00000491165 SERPINB7O75635 380 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 MAGP20916 626 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 CD1CP29017 333 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 HPCAL1P37235 193 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 GPR3P46089 330 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 EPHA4P54764 986 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 VBP1P61758 197 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 VEZF1Q14119 521 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 SMN1Q16637 294 aaKnown RBP21.5■■□□□ 1.03
USF3-203ENST00000491165 NXPE4Q6UWF7 544 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 USP53Q70EK8 1073 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 PRSS48Q7RTY5 328 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 FAM129CQ86XR2 697 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 CDC26Q8NHZ8 85 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 IPCEF1Q8WWN9 437 aaPredicted RBP21.5■■□□□ 1.03
USF3-203ENST00000491165 STARD8Q92502 1023 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 TAMM41Q96BW9 452 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 CCDC3Q9BQI4 270 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 RHNO1Q9BSD3 238 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 PCBD2Q9H0N5 130 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 MRPS30Q9NP92 439 aaKnown RBP21.5■■□□□ 1.03
USF3-203ENST00000491165 FBXO8Q9NRD0 319 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 RUVBL1Q9Y265 456 aaKnown RBP21.5■■□□□ 1.03
USF3-203ENST00000491165 A0A1W2PQM1 296 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 C2orf74A8MZ97 194 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 ATP6V1G1O75348 118 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 EPHA2P29317 976 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 GRK3P35626 688 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 KRT20P35900 424 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 C21orf58P58505 322 aa21.5■■□□□ 1.03
USF3-203ENST00000491165 PCDH1Q08174 1060 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms