RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 NT5EP21589 574 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 SOX11P35716 441 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 FEN1P39748 380 aaKnown RBP14.75□□□□□ -0.05
TRA2A-208ENST00000490942 ATP4BP51164 291 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 CCL11P51671 97 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 LRRC74AQ0VAA2 488 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 MGAT2Q10469 447 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 RPS6KA2Q15349 733 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 ZNF628Q5EBL2 1059 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 AGAP7PQ5VUJ5 663 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 TCTN3Q6NUS6 607 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 IGFL3Q6UXB1 125 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 OR5L2Q8NGL0 311 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 CLHC1Q8NHS4 586 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 NUBPLQ8TB37 319 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 ZNF721Q8TF20 911 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 PPWD1Q96BP3 646 aaKnown RBP14.75□□□□□ -0.05
TRA2A-208ENST00000490942 AGAP4Q96P64 663 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 LMF1Q96S06 567 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 UBL7Q96S82 380 aaPredicted RBP14.75□□□□□ -0.05
TRA2A-208ENST00000490942 EBF4Q9BQW3 602 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 ARHGAP9Q9BRR9 750 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 SLC25A23Q9BV35 468 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 KCNK13Q9HB14 408 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 NPHS2Q9NP85 383 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 MAT2BQ9NZL9 334 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 SH3BP4Q9P0V3 963 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 KLHL14Q9P2G3 628 aa14.75□□□□□ -0.05
TRA2A-208ENST00000490942 A8MUA0 341 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 AKAP10O43572 662 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 PLOD3O60568 738 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 DNAJB5O75953 348 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 ZFAND5O76080 213 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 LRATO95237 230 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 LSP1P33241 339 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 KCNAB2Q13303 367 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 IGFL2Q6UWQ7 119 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 HSDL2Q6YN16 418 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 CCDC116Q8IYX3 515 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 VWA5B2Q8N398 1253 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 C17orf47Q8NEP4 570 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 FDCSPQ8NFU4 85 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 PSMA8Q8TAA3 256 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 TM9SF4Q92544 642 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 GFM2Q969S9 779 aaKnown RBP14.74□□□□□ -0.05
TRA2A-208ENST00000490942 NCLNQ969V3 563 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 ZNF354BQ96LW1 612 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 AMDHD1Q96NU7 426 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 OR8D2Q9GZM6 311 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 RNF32Q9H0A6 362 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 RABEP2Q9H5N1 569 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 CLMPQ9H6B4 373 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 ZNF552Q9H707 407 aaPredicted RBP14.74□□□□□ -0.05
TRA2A-208ENST00000490942 NEUROD4Q9HD90 331 aa14.74□□□□□ -0.05
TRA2A-208ENST00000490942 A0A0G2JND7 137 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 A0A1W2PS29 197 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 E9PBE3 544 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 ITGAMP11215 1152 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 S1PR1P21453 382 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 KIR3DL1P43629 444 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 NCBP2P52298 156 aaKnown RBP eCLIP14.73□□□□□ -0.054e-45■■■■■ 49.9
TRA2A-208ENST00000490942 SLC37A1P57057 533 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 STX1BP61266 288 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 PSPHP78330 225 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 ZNF267Q14586 743 aaPredicted RBP14.73□□□□□ -0.05
TRA2A-208ENST00000490942 PRSS53Q2L4Q9 553 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 MPEG1Q2M385 716 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 ANXA8L1Q5VT79 327 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 ISLR2Q6UXK2 745 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 DGAT2L6Q6ZPD8 337 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 MIER2Q8N344 545 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 KRTCAP2Q8N6L1 136 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 VPS37AQ8NEZ2 397 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 BRIX1Q8TDN6 353 aaKnown RBP14.73□□□□□ -0.05
TRA2A-208ENST00000490942 OR5P2Q8WZ92 322 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 ZBTB18Q99592 522 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 DUSP26Q9BV47 211 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 DEFB126Q9BYW3 111 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 NSRP1Q9H0G5 558 aaKnown RBP14.73□□□□□ -0.05
TRA2A-208ENST00000490942 GLIPR2Q9H4G4 154 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 PTGFRNQ9P2B2 879 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 DCTN4Q9UJW0 460 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 ZNF223Q9UK11 482 aaPredicted RBP14.73□□□□□ -0.05
TRA2A-208ENST00000490942 LHX6Q9UPM6 363 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 ERVK-19Q9WJR5 959 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 ZNF451Q9Y4E5 1061 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 SCN2AQ99250 2005 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 MED13Q9UHV7 2174 aa14.73□□□□□ -0.05
TRA2A-208ENST00000490942 TRBV11-1A0A0K0K1C0 115 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 GMNCA6NCL1 334 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 RNASET2O00584 256 aaKnown RBP14.72□□□□□ -0.05
TRA2A-208ENST00000490942 PRAMEF2O60811 474 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 SLC22A3O75751 556 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 IL6P05231 212 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 LAMP1P11279 417 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 PGDP52209 483 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 ARFIP2P53365 341 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 RNF4P78317 190 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 DUSP2Q05923 314 aa14.72□□□□□ -0.05
TRA2A-208ENST00000490942 MFAP5Q13361 173 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms