RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	LHCGR	P22888	699 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	MATK	P42679	507 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	IL10RB	Q08334	325 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	TRAP1	Q12931	704 aa	Known RBP	4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	NPRL3	Q12980	569 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FHL1	Q13642	323 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	TAF13	Q15543	124 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CCDC92	Q53HC0	331 aa	Predicted RBP	4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FAM78A	Q5JUQ0	283 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	SLC35D3	Q5M8T2	416 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	LIN9	Q5TKA1	542 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	TTC27	Q6P3X3	843 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PLBD1	Q6P4A8	553 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FOXL2NB	Q6ZUU3	175 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	MEX3D	Q86XN8	651 aa	Known RBP	4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CCDC47	Q96A33	483 aa	Known RBP	4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CENPT	Q96BT3	561 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	SCRN2	Q96FV2	425 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PDLIM5	Q96HC4	596 aa	Known RBP	4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	NDN	Q99608	321 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ZNF559	Q9BR84	538 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CUEDC2	Q9H467	287 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	THAP9	Q9H5L6	903 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	RNF121	Q9H920	327 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CHST11	Q9NPF2	352 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ASCL3	Q9NQ33	180 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FGF21	Q9NSA1	209 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PDRG1	Q9NUG6	133 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	MOSPD1	Q9UJG1	213 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	GPR132	Q9UNW8	380 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	RP1	P56715	2156 aa		4.36	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PRKDC	P78527	4128 aa	Known RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	IGLV9-49	A0A0B4J1Y8	123 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	C13orf42	A0A1B0GVH6	325 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476		A0A1W2PN81	502 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	SERINC4	A6NH21	518 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	TMEM150C	B9EJG8	249 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	BUB3	O43684	328 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PRKN	O60260	465 aa	Predicted RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CIDEA	O60543	219 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	RAD51D	O75771	328 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	GLCE	O94923	617 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	AMD1	P17707	334 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	KLK2	P20151	261 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	EFNA1	P20827	205 aa	Predicted RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	SFTPD	P35247	375 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CHRNA7	P36544	502 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CASP3	P42574	277 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	MAGEB1	P43366	347 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	NR2C2	P49116	596 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	KHK	P50053	298 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	GAS1	P54826	345 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	MAZ	P56270	477 aa	Known RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	KIAA1024L	P59773	190 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	AKAP17A	Q02040	695 aa	Known RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ZNF33A	Q06730	810 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PPM1L	Q5SGD2	360 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PRAMEF8	Q5VWM4	474 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FUT10	Q6P4F1	479 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	C9orf139	Q6ZV77	190 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	G2E3	Q7L622	706 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ISCA2	Q86U28	154 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ZSCAN30	Q86W11	494 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	TGIF2LY	Q8IUE0	185 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	MFSD6L	Q8IWD5	586 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PEX5L	Q8IYB4	626 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CIART	Q8N365	385 aa	Predicted RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	DEFB119	Q8N690	84 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	OR52N5	Q8NH56	324 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PSMA8	Q8TAA3	256 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CDKN2AIPNL	Q96HQ2	116 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PANX3	Q96QZ0	392 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	MEIS3	Q99687	375 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ATG101	Q9BSB4	218 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	WAC	Q9BTA9	647 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FUCA2	Q9BTY2	467 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	OR2B2	Q9GZK3	357 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	SDCBP2	Q9H190	292 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ACTL8	Q9H568	366 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	RNPEPL1	Q9HAU8	725 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FAM118A	Q9NWS6	357 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	GTSE1	Q9NYZ3	720 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	HMG20B	Q9P0W2	317 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	NOCT	Q9UK39	431 aa	Known RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CCPG1	Q9ULG6	757 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	PA2G4	Q9UQ80	394 aa	Known RBP	4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	POLE	Q07864	2286 aa		4.35	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CHD3	Q12873	2000 aa	Known RBP	4.34	□□□□□ -1.71
SSX2IP-208	ENST00000490476	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.34	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ILVBL	A1L0T0	632 aa		4.34	□□□□□ -1.71
SSX2IP-208	ENST00000490476		E5RGE8	158 aa		4.34	□□□□□ -1.71
SSX2IP-208	ENST00000490476	ZNF197	O14709	1029 aa		4.34	□□□□□ -1.71
SSX2IP-208	ENST00000490476	FPGT	O14772	594 aa		4.34	□□□□□ -1.71
SSX2IP-208	ENST00000490476	CHAD	O15335	359 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms