RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 CCDC177Q9NQR7 707 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 NECTIN3Q9NQS3 549 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 THSD1Q9NS62 852 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TM7SF3Q9NS93 570 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 KRT84Q9NSB2 600 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 PDP1Q9P0J1 537 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SH3BP4Q9P0V3 963 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 KIF17Q9P2E2 1029 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 DEC1Q9P2X7 70 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 WARS2Q9UGM6 360 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TMEFF2Q9UIK5 374 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ADAM29Q9UKF5 820 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 NDRG4Q9ULP0 352 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ICKQ9UPZ9 632 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 CCL26Q9Y258 94 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SAMHD1Q9Y3Z3 626 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 FAM32AQ9Y421 112 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 WNT6Q9Y6F9 365 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MYOFQ9NZM1 2061 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 JMJD1CQ15652 2540 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 NUP210Q8TEM1 1887 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 A0A1B0GTW7 788 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 A0A1W2PRB8 838 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 C1orf226A1L170 272 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 TMEM247A6NEH6 219 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 FADS2P1A8MWK0 482 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 E7EQ34 232 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PTGES3LE9PB15 166 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 M0R3G1 203 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 TNFRSF11BO00300 401 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 SLC1A7O00341 560 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 NPC1O15118 1278 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 KLK10O43240 276 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PRAMEF4O60810 478 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ADAM11O75078 769 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 GUCY1B2O75343 617 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 MTX2O75431 263 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 POP7O75817 140 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CLPXO76031 633 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PDE9AO76083 593 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ATE1O95260 518 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 SLC16A8O95907 504 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 EGFP01133 1207 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CYP17A1P05093 508 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CD22P20273 847 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 EFNA1P20827 205 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PRKACGP22612 351 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 RRM2P31350 389 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 SHMT2P34897 504 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 KRT20P35900 424 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CDKN2CP42773 168 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ALDH9A1P49189 494 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ANXA11P50995 505 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 DAPP51397 102 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 HMGA2P52926 109 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ARFIP1P53367 373 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CTSCP53634 463 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PLA2G16P53816 162 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 RPS13P62277 151 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 RPP38P78345 283 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 RAE1P78406 368 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 RPL6Q02878 288 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 TAP2Q03519 686 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CNTN1Q12860 1018 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 NPRL3Q12980 569 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 TARDBPQ13148 414 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 DDX39BQ13838 428 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PDE7AQ13946 482 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 C16orf72Q14CZ0 275 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 HEPACAMQ14CZ8 416 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF124Q15973 351 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF658BQ4V348 819 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 FNDC3BQ53EP0 1204 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PYCR3Q53H96 274 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CRB2Q5IJ48 1285 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF648Q5T619 568 aaPredicted RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PRAMEF9Q5VWM5 478 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 FAM219BQ5XKK7 198 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 TMEM215Q68D42 235 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 RAET1GQ6H3X3 334 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 FAM71E1Q6IPT2 247 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ANKRD26P1Q6NSI1 321 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 C16orf87Q6PH81 154 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 Q6ZNX1 250 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ERN2Q76MJ5 926 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PARS2Q7L3T8 475 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PRSS48Q7RTY5 328 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 TRMT11Q7Z4G4 463 aaKnown RBP4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CYP4Z1Q86W10 505 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 ATCAYQ86WG3 371 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 C17orf64Q86WR6 236 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 PTOV1Q86YD1 416 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 P3H2Q8IVL5 708 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 CHPFQ8IZ52 775 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 MMP21Q8N119 569 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 LINC00471Q8N535 108 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 TBC1D19Q8N5T2 526 aa4.8□□□□□ -1.64
PTPRK-213ENST00000490332 FAM86B1Q8N7N1 296 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms