RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 RAD9AQ99638 391 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 FAM118AQ9NWS6 357 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SLC6A5Q9Y345 797 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 TRBV2A0A0J9YWF9 115 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 C13orf42A0A1B0GVH6 325 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SCAMP2O15127 329 aaKnown RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CYB5BO43169 146 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PORP16435 677 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CAPN3P20807 821 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 RAB5BP61020 215 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 HNRNPA0Q13151 305 aaKnown RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 METTL11BQ5VVY1 283 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 MAMDC2Q7Z304 686 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SERPINA11Q86U17 422 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CENPSQ8N2Z9 138 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 GALNT6Q8NCL4 622 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 RNF128Q8TEB7 428 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 FOXRED1Q96CU9 486 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 BORCS6Q96GS4 357 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ACTRT3Q9BYD9 372 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CRYBG1Q9Y4K1 1723 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 GMFGO60234 142 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 CREB1P16220 341 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 FBLP22087 321 aaKnown RBP8.46□□□□□ -1.05
LSAMP-205ENST00000490035 AMZ1Q400G9 498 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 NXPE4Q6UWF7 544 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 ZBTB46Q86UZ6 589 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 PQLC3Q8N755 202 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 SMOQ99835 787 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 SLA2Q9H6Q3 261 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 RDH14Q9HBH5 336 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 HSFX1Q9UBD0 423 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 TRBV23OR9-2A0A075B6M9 112 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 C2orf92A0A1B0GVN3 265 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 C9JVG2 144 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 MTNR1AP48039 350 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 PER3P56645 1201 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 OGDHQ02218 1023 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 KCNAB2Q13303 367 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 C2orf27AQ580R0 203 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 MAMDC4Q6UXC1 1216 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 SCML4Q8N228 414 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 OR52N2Q8NGI0 321 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 FAM46BQ96A09 425 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 HIF3AQ9Y2N7 669 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF541Q9H0D2 1346 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 ACOT7O00154 380 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 TRAPPC6AO75865 159 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 CRABP1P29762 137 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 PCGF2P35227 344 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 HNRNPKP61978 463 aaKnown RBP eCLIP8.46□□□□□ -1.05
LSAMP-205ENST00000490035 SNTB2Q13425 540 aaKnown RBP8.46□□□□□ -1.05
LSAMP-205ENST00000490035 FBXO48Q5FWF7 155 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 OR4C11Q6IEV9 310 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 SFXN5Q8TD22 340 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 SMARCD2Q92925 531 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 DMRTB1Q96MA1 342 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 KLHL9Q9P2J3 617 aa8.46□□□□□ -1.05
LSAMP-205ENST00000490035 FARSAQ9Y285 508 aaKnown RBP8.46□□□□□ -1.05
LSAMP-205ENST00000490035 POLR1CO15160 346 aaPredicted RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 ACVRL1P37023 503 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 MLC1Q15049 377 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 TMEM173Q86WV6 379 aaPredicted RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 SNX29P2Q8IUI4 249 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 OR13C3Q8NGS6 347 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 TMEM174Q8WUU8 243 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 MGLLQ99685 303 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 SPHK2Q9NRA0 654 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 SLC6A14Q9UN76 642 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 H3BSA7 217 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 FOXE1O00358 373 aaPredicted RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 SYPP08247 313 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 CMTM8Q8IZV2 173 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 SLC43A2Q8N370 569 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 TMEM68Q96MH6 324 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 CDC6Q99741 560 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 ANKRD28O15084 1053 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 SNNO75324 88 aaPredicted RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 LHCGRP22888 699 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 HOXC13P31276 330 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 OGFRL1Q5TC84 451 aaPredicted RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 CCSAPQ6IQ19 270 aaPredicted RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 ZC3H14Q6PJT7 736 aaKnown RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 OR9A4Q8NGU2 314 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 TMEM203Q969S6 136 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 HRASLS2Q9NWW9 162 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 PTTG3PQ9NZH4 202 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 ICKQ9UPZ9 632 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 SLC35A3Q9Y2D2 325 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 S1PR4O95977 384 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 PRKCAP17252 672 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 AMY2BP19961 511 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 CHMP24386 653 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 ALDH3B2P48448 385 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 RAB28P51157 221 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 DAP3P51398 398 aaKnown RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 POLR2HP52434 150 aaKnown RBP8.46□□□□□ -1.06
LSAMP-205ENST00000490035 FAM182AQ5T1J6 154 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 PHTF2Q8N3S3 785 aa8.46□□□□□ -1.06
LSAMP-205ENST00000490035 KCNIP1Q9NZI2 227 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms