RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 AMER2Q8N7J2 671 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 TP53I13Q8NBR0 393 aaPredicted RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 SIMC1Q8NDZ2 872 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 OR6T1Q8NGN1 323 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 SETD7Q8WTS6 366 aaKnown RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 KAT2AQ92830 837 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 NEURL3Q96EH8 262 aa14.87□□□□□ -0.03
BRD9-208ENST00000489816 C6orf106Q9H6K1 298 aaPredicted RBP14.87□□□□□ -0.03
BRD9-208ENST00000489816 MDC1Q14676 2089 aaKnown RBP14.86□□□□□ -0.03
BRD9-208ENST00000489816 CXorf51AA0A1B0GTR3 108 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 GPX5O75715 221 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 EIF2DP41214 584 aaKnown RBP14.86□□□□□ -0.03
BRD9-208ENST00000489816 MAGEA10P43363 369 aaPredicted RBP14.86□□□□□ -0.03
BRD9-208ENST00000489816 PCDH1Q08174 1060 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 SLAMF1Q13291 335 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 SSX1Q16384 188 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 FAM46CQ5VWP2 391 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 LIPKQ5VXJ0 399 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 SAXO2Q658L1 398 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 CASP12Q6UXS9 341 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 FBXL6Q8N531 539 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 OR5P2Q8WZ92 322 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 OTULINQ96BN8 352 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 TRMT61AQ96FX7 289 aaKnown RBP14.86□□□□□ -0.03
BRD9-208ENST00000489816 KXD1Q9BQD3 176 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 WDR26Q9H7D7 661 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 SNTG1Q9NSN8 517 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 YARS2Q9Y2Z4 477 aaKnown RBP14.86□□□□□ -0.03
BRD9-208ENST00000489816 CACNA1IQ9P0X4 2223 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 ZAR1LA6NP61 321 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 C1QTNF3-AMACRE9PGA6 284 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 KAT7O95251 611 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 DPTQ07507 201 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 PODNL1Q6PEZ8 512 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 VITQ6UXI7 678 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 LYSMD2Q8IV50 215 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 OR4N5Q8IXE1 308 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 KLHDC8AQ8IYD2 350 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 ZFP41Q8N8Y5 198 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 OR14C36Q8NHC7 312 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 RGMAQ96B86 450 aa14.86□□□□□ -0.03
BRD9-208ENST00000489816 SCHIP1Q9P0W5 487 aaPredicted RBP14.86□□□□□ -0.03
BRD9-208ENST00000489816 ALPK3Q96L96 1907 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 AGAP5A6NIR3 686 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 HMGN2P05204 90 aaKnown RBP14.85□□□□□ -0.03
BRD9-208ENST00000489816 CERS1P27544 350 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 GJA4P35212 333 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 MAPK9P45984 424 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 LIMS1P48059 325 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 IRF4Q15306 451 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 ZNF770Q6IQ21 691 aaPredicted RBP14.85□□□□□ -0.03
BRD9-208ENST00000489816 USP43Q70EL4 1123 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 UBE2J2Q8N2K1 259 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 ZBTB8BQ8NAP8 495 aaPredicted RBP14.85□□□□□ -0.03
BRD9-208ENST00000489816 ZBED6CLQ96FA7 236 aaPredicted RBP14.85□□□□□ -0.03
BRD9-208ENST00000489816 PLA2G2FQ9BZM2 168 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 EGLN3Q9H6Z9 239 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 PRKYO43930 277 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 BCL6P41182 706 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 OR4C11Q6IEV9 310 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 ACSM5Q6NUN0 579 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 UNC5DQ6UXZ4 953 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 B3GLCTQ6Y288 498 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 CCDC80Q76M96 950 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 FAM46DQ8NEK8 389 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 SMARCD2Q92925 531 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 LINC00615Q96LM1 132 aaPredicted RBP14.85□□□□□ -0.03
BRD9-208ENST00000489816 MENTQ9BUN1 341 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 REV1Q9UBZ9 1251 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 UGT2B17O75795 530 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 GRK3P35626 688 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 CLDN2P57739 230 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 DAB2P98082 770 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 LTB4RQ15722 352 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 ZMAT1Q5H9K5 638 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 PLAG1Q6DJT9 500 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 TMEFF1Q8IYR6 380 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 OR8H2Q8N162 312 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 OR2A1Q8NGT9 310 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 SLC35G5Q96KT7 338 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 FNDC11Q9BVV2 318 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 POLR2J2Q9GZM3 115 aaKnown RBP14.85□□□□□ -0.03
BRD9-208ENST00000489816 PLCXD1Q9NUJ7 323 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 CNIH4Q9P003 139 aa14.85□□□□□ -0.03
BRD9-208ENST00000489816 HNRNPA1P09651 372 aaKnown RBP eCLIP14.84□□□□□ -0.03
BRD9-208ENST00000489816 PCSK2P16519 638 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 SERPINB1P30740 379 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 TMED10P49755 219 aaKnown RBP14.84□□□□□ -0.03
BRD9-208ENST00000489816 CSNK2BP67870 215 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 ALDH6A1Q02252 535 aaKnown RBP14.84□□□□□ -0.03
BRD9-208ENST00000489816 ID2Q02363 134 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 OR2G6Q5TZ20 316 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 PGBD2Q6P3X8 592 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 ZER1Q7Z7L7 766 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 OR4E2Q8NGC2 313 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 FCGR1BQ92637 280 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 TOR4AQ9NXH8 423 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 STON1Q9Y6Q2 735 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 LTBP2Q14767 1821 aa14.84□□□□□ -0.03
BRD9-208ENST00000489816 A0A1W2PR48 441 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms