RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 EBPLQ9BY08 206 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.87□□□□□ -0.838e-7■■■□□ 15.6
SCAMP4-208ENST00000489554 MMADHCQ9H3L0 296 aaPredicted RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 MMP25Q9NPA2 562 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 SLC52A3Q9NQ40 469 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 PRDM9Q9NQV7 894 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 SDR39U1Q9NRG7 319 aaPredicted RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 PLA2G3Q9NZ20 509 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 STMN3Q9NZ72 180 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 NOP53Q9NZM5 478 aaKnown RBP9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ABI3Q9P2A4 366 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 BAIAP2L1Q9UHR4 511 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 MCM8Q9UJA3 840 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ADAM29Q9UKF5 820 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 NTNG1Q9Y2I2 539 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 TMED5Q9Y3A6 229 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 ASB4Q9Y574 426 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 FLNCQ14315 2725 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 LRRK2Q5S007 2527 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 DOCK10Q96BY6 2186 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 SHANK1Q9Y566 2161 aa9.87□□□□□ -0.83
SCAMP4-208ENST00000489554 OR5H15A6NDH6 313 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 A8MUI8 341 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 CAPN14A8MX76 684 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 SLC22A2O15244 555 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 B3GALT2O43825 422 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 PCDH7O60245 1069 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 B4GALT2O60909 372 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 WDPCPO95876 746 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 KLK1P06870 262 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 EDN3P14138 238 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 NQO1P15559 274 aaKnown RBP9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 SSR2P43308 183 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 RAP1GDS1P52306 607 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 C21orf58P58505 322 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 TAS2R50P59544 299 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 BTN3A2P78410 334 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 TGM3Q08188 693 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 RUNX2Q13950 521 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 PTGR1Q14914 329 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 MEP1AQ16819 746 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 PRSS53Q2L4Q9 553 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 EIF2S3LQ2VIR3 472 aaKnown RBP9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 PDCD4Q53EL6 469 aaKnown RBP9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 TRIM40Q6P9F5 258 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 NUDT13Q86X67 352 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 TREML1Q86YW5 311 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 MMP21Q8N119 569 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 LGI4Q8N135 537 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 CA13Q8N1Q1 262 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 LIX1Q8N485 282 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 SLC5A8Q8N695 610 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 BCORP1Q8N888 145 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 ACOT4Q8N9L9 421 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 OR9I1Q8NGQ6 314 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 PRR7Q8TB68 274 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 C16orf78Q8WTQ4 265 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 SSC4DQ8WTU2 575 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 UCN3Q969E3 161 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 TM4SF18Q96CE8 201 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 PTCHD1Q96NR3 888 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 MAPKAP1Q9BPZ7 522 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 LRMDAQ9H2I8 198 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 NMRK1Q9NWW6 199 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 TEX10Q9NXF1 929 aaPredicted RBP9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 KCMF1Q9P0J7 381 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 ARMCX1Q9P291 453 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 HECTD1Q9ULT8 2610 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 MMACHCQ9Y4U1 282 aa9.86□□□□□ -0.83
SCAMP4-208ENST00000489554 PTPN13Q12923 2485 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 IGKV3D-11A0A0A0MRZ8 115 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 TCRBV16S1A1N1A0A5B0 115 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 BLACEA4D250 179 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 SYNDIG1LA6NDD5 238 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 CLDN4O14493 209 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 CDK2AP1O14519 115 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 PRAMEF2O60811 474 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 DDAH2O95865 285 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 ANXA4P09525 319 aaPredicted RBP9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 PRPS2P11908 318 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 IDO1P14902 403 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 PRDX6P30041 224 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 MTTPP55157 894 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 RAB38P57729 211 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 SLC26A5P58743 744 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 NCALDP61601 193 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 UFM1P61960 85 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 BTG2P78543 158 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 MAD2L1Q13257 205 aaPredicted RBP9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 RIPK1Q13546 671 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 PDE7AQ13946 482 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 GSTA3Q16772 222 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 ACER2Q5QJU3 275 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 FAM71E1Q6IPT2 247 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 PAOXQ6QHF9 649 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 ASRGL1Q7L266 308 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 KRTCAP2Q8N6L1 136 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 SRFBP1Q8NEF9 429 aaKnown RBP9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 CLHC1Q8NHS4 586 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms