RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 ATP1B1P05026 303 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 ALDOCP09972 364 aaKnown RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 G6PDP11413 515 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 SFTPCP11686 197 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 LBPP18428 481 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 EFNA1P20827 205 aaPredicted RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 NTSP30990 170 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 MRPS35P82673 323 aaKnown RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 GUCY1A3Q02108 690 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 EMX2Q04743 252 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 NADK2Q4G0N4 442 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 ACER2Q5QJU3 275 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 ABHD17BQ5VST6 288 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 H3F3CQ6NXT2 135 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 LARP4Q71RC2 724 aaKnown RBP eCLIP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 C9orf40Q8IXQ3 194 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 VWA5B2Q8N398 1253 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 ARFGAP2Q8N6H7 521 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 SUN3Q8TAQ9 357 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 CIDECQ96AQ7 238 aaPredicted RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 PPCDCQ96CD2 204 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 ART5Q96L15 291 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 MARK4Q96L34 752 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 OR52B2Q96RD2 323 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 CDCP1Q9H5V8 836 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 REEP4Q9H6H4 257 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 EPS8L2Q9H6S3 715 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 LIN28AQ9H9Z2 209 aaKnown RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 ASIC5Q9NY37 505 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 MAT2BQ9NZL9 334 aa13.4□□□□□ -0.26
HLA-F-229ENST00000489502 EIF3LQ9Y262 564 aaKnown RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 WBP11Q9Y2W2 641 aaKnown RBP13.4□□□□□ -0.26
HLA-F-229ENST00000489502 PDPK1O15530 556 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 KLHL41O60662 606 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 VPS4BO75351 444 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 PRPS2P11908 318 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 PCSK2P16519 638 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 GALNSP34059 522 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 SOX18P35713 384 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 NCBP2P52298 156 aaKnown RBP eCLIP13.39□□□□□ -0.27
HLA-F-229ENST00000489502 MGAT2Q10469 447 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 MAD2L1Q13257 205 aaPredicted RBP13.39□□□□□ -0.27
HLA-F-229ENST00000489502 BIKQ13323 160 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 PDE7AQ13946 482 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 EXOSC7Q15024 291 aaKnown RBP13.39□□□□□ -0.27
HLA-F-229ENST00000489502 MPEG1Q2M385 716 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 PRICKLE4Q2TBC4 344 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 NXNQ6DKJ4 435 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 HSDL2Q6YN16 418 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 RGS9BPQ6ZS82 235 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 CCDC116Q8IYX3 515 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 FAM9CQ8IZT9 166 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 RBMXL3Q8N7X1 1067 aaKnown RBP13.39□□□□□ -0.27
HLA-F-229ENST00000489502 LSM14AQ8ND56 463 aaKnown RBP13.39□□□□□ -0.27
HLA-F-229ENST00000489502 SIMC1Q8NDZ2 872 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 C7orf57Q8NEG2 295 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 OR7A2PQ8NGA2 310 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 KAT2AQ92830 837 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 GAL3ST4Q96RP7 486 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 ANKRA2Q9H9E1 313 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 ANKRD10Q9NXR5 420 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 SH3BP4Q9P0V3 963 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 TEKT2Q9UIF3 430 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 PCDHGB7Q9Y5F8 929 aa13.39□□□□□ -0.27
HLA-F-229ENST00000489502 TMEM200CA6NKL6 621 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 GABRR3A8MPY1 467 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 MYO1GB0I1T2 1018 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 DPM1O60762 260 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 EDF1O60869 148 aaKnown RBP13.38□□□□□ -0.27
HLA-F-229ENST00000489502 ZFAND5O76080 213 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 WDPCPO95876 746 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 NME5P56597 212 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 SLC37A1P57057 533 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 MLF1P58340 268 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 RNF4P78317 190 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 ARG2P78540 354 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 DUSP8Q13202 625 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 CEBPEQ15744 281 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 MEP1AQ16819 746 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 SMU1Q2TAY7 513 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 ZNF628Q5EBL2 1059 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 TMEM198Q66K66 360 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 SLC6A19Q695T7 634 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 OGFOD2Q6N063 350 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 IGFL2Q6UWQ7 119 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 RPS19BP1Q86WX3 136 aaKnown RBP13.38□□□□□ -0.27
HLA-F-229ENST00000489502 SAMD14Q8IZD0 417 aaPredicted RBP13.38□□□□□ -0.27
HLA-F-229ENST00000489502 TM9SF4Q92544 642 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 ZNF764Q96H86 408 aaPredicted RBP13.38□□□□□ -0.27
HLA-F-229ENST00000489502 MAELQ96JY0 434 aaKnown RBP13.38□□□□□ -0.27
HLA-F-229ENST00000489502 ZNF354BQ96LW1 612 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 GLIPR2Q9H4G4 154 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 AIG1Q9NVV5 245 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 TAS2R7Q9NYW3 318 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 ATP6V1HQ9UI12 483 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 DTX4Q9Y2E6 619 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 ZNF462Q96JM2 2506 aa13.38□□□□□ -0.27
HLA-F-229ENST00000489502 EIF4E1BA6NMX2 242 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms