RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CSHL1Q14406 222 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 EFTUD2Q15029 972 aaKnown RBP eCLIP13.5□□□□□ -0.259e-9■■■■■ 27.7
UFD1-209ENST00000489406 DGAT2L6Q6ZPD8 337 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 SLC29A4Q7RTT9 530 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 SDCCAG8Q86SQ7 713 aaPredicted RBP13.5□□□□□ -0.25
UFD1-209ENST00000489406 ATG4DQ86TL0 474 aaPredicted RBP13.5□□□□□ -0.25
UFD1-209ENST00000489406 IFNEQ86WN2 208 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 TAGAPQ8N103 731 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 GAL3ST3Q96A11 431 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 PPWD1Q96BP3 646 aaKnown RBP13.5□□□□□ -0.25
UFD1-209ENST00000489406 OR4K3Q96R72 315 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 WWTR1Q9GZV5 400 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 GOLPH3Q9H4A6 298 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 DNAJC11Q9NVH1 559 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 CISD1Q9NZ45 108 aaKnown RBP13.5□□□□□ -0.25
UFD1-209ENST00000489406 ADAMTS6Q9UKP5 1117 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 PDE10AQ9Y233 779 aa13.5□□□□□ -0.25
UFD1-209ENST00000489406 CAPN14A8MX76 684 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 ERI3O43414 337 aaKnown RBP13.49□□□□□ -0.25
UFD1-209ENST00000489406 COX7A2P14406 83 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 STXBP1P61764 594 aaKnown RBP13.49□□□□□ -0.25
UFD1-209ENST00000489406 ZNF844Q08AG5 666 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 RAB35Q15286 201 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 SHISA2Q6UWI4 295 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 SEZ6L2Q6UXD5 910 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 RHOT2Q8IXI1 618 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 SNX31Q8N9S9 440 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 FAM216AQ8WUB2 273 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 NEIL2Q969S2 332 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 RHBDF1Q96CC6 855 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 NAP1L5Q96NT1 182 aaPredicted RBP13.49□□□□□ -0.25
UFD1-209ENST00000489406 ZNF747Q9BV97 191 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 TRIM2Q9C040 744 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 OR2B2Q9GZK3 357 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 FAIMQ9NVQ4 179 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 MOCS1Q9NZB8 636 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 DAPP1Q9UN19 280 aa13.49□□□□□ -0.25
UFD1-209ENST00000489406 EPN1Q9Y6I3 576 aaPredicted RBP13.49□□□□□ -0.25
UFD1-209ENST00000489406 UQCRHLA0A096LP55 91 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 CDC7O00311 574 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 ENO3P13929 434 aaPredicted RBP13.48□□□□□ -0.25
UFD1-209ENST00000489406 CERS1P27544 350 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 HNRNPH1P31943 449 aaKnown RBP13.48□□□□□ -0.25
UFD1-209ENST00000489406 REEP5Q00765 189 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 FGFBP1Q14512 234 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 SLC18A3Q16572 532 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 AGAP6Q5VW22 663 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 MRNIPQ6NTE8 343 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 AAGABQ6PD74 315 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 KLHDC8AQ8IYD2 350 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 UBQLNLQ8IYU4 475 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 SLC5A11Q8WWX8 675 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 MS4A6EQ96DS6 147 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 TSNARE1Q96NA8 513 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 TREX1Q9NSU2 369 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 TMEFF2Q9UIK5 374 aaPredicted RBP13.48□□□□□ -0.25
UFD1-209ENST00000489406 CMYA5Q8N3K9 4069 aa13.48□□□□□ -0.25
UFD1-209ENST00000489406 IQANK1A0A1B0GTG1 560 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 PJA2O43164 708 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 TCEA1P23193 301 aaKnown RBP13.47□□□□□ -0.25
UFD1-209ENST00000489406 NMBRP28336 390 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 PLA2G16P53816 162 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 GDF10P55107 478 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 C21orf58P58505 322 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 CTBP1Q13363 440 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 RCN2Q14257 317 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 SETDB1Q15047 1291 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 CTU2Q2VPK5 515 aaKnown RBP13.47□□□□□ -0.25
UFD1-209ENST00000489406 FAM214BQ7L5A3 538 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 OR4N5Q8IXE1 308 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 CPNE9Q8IYJ1 553 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 CCT6BQ92526 530 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 FBXL20Q96IG2 436 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 SFXN2Q96NB2 322 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 DGAT2Q96PD7 388 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 ACTR8Q9H981 624 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 RNF122Q9H9V4 155 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.47□□□□□ -0.25
UFD1-209ENST00000489406 TAS2R10Q9NYW0 307 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 CADP27708 2225 aa13.47□□□□□ -0.25
UFD1-209ENST00000489406 A0A088AWK7 358 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 PFDN6O15212 129 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 DYRK3O43781 588 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 RAMP1O60894 148 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 VAPBO95292 243 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 ZNF10P21506 573 aaPredicted RBP13.46□□□□□ -0.25
UFD1-209ENST00000489406 ARNTP27540 789 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 STT3AP46977 705 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 HERVK_113P63132 956 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 ERVK-8P63133 956 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 RPP38P78345 283 aaKnown RBP13.46□□□□□ -0.25
UFD1-209ENST00000489406 CRADDP78560 199 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 ZBED6P86452 979 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 BSPH1Q075Z2 132 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 DOC2AQ14183 400 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 EBPQ15125 230 aaKnown RBP13.46□□□□□ -0.25
UFD1-209ENST00000489406 PCID2Q5JVF3 399 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 RNF111Q6ZNA4 994 aa13.46□□□□□ -0.25
UFD1-209ENST00000489406 PEG10Q86TG7 708 aaKnown RBP13.46□□□□□ -0.25
UFD1-209ENST00000489406 PRR22Q8IZ63 422 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms