RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 MSH2P43246 934 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 RPL21P46778 160 aaKnown RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 KCNJ5P48544 419 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 MASP1P48740 699 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 STARP49675 285 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 LIM2P55344 173 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 FBXW4P57775 412 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 NTRK2Q16620 822 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 FAM174BQ3ZCQ3 159 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 LIPNQ5VXI9 398 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 C11orf63Q6NUN7 778 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 DGAT2L6Q6ZPD8 337 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 GRAMD2AQ8IUY3 354 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 DND1Q8IYX4 353 aaKnown RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 CD200R1Q8TD46 325 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 SLC5A11Q8WWX8 675 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 ALG3Q92685 438 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 GAL3ST3Q96A11 431 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 PLPPR2Q96GM1 343 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 C1orf159Q96HA4 380 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 SENP5Q96HI0 755 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 FAR2Q96K12 515 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 CCDC42Q96M95 316 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 TNFRSF13CQ96RJ3 184 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 GAL3ST4Q96RP7 486 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 DNAJC7Q99615 494 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 SLC39A3Q9BRY0 314 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 NHEJ1Q9H9Q4 299 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 TEX10Q9NXF1 929 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 ELOVL5Q9NYP7 299 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 FETUBQ9UGM5 382 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 INTUQ9ULD6 942 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 LIPT1Q9Y234 373 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 DHRS7Q9Y394 339 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 MAGED1Q9Y5V3 778 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 FAM234BA2RU67 622 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 PFDN6O15212 129 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 APRTP07741 180 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 DANCRP0C864 163 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 ETS1P14921 441 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 PAMP19021 973 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 OGNP20774 298 aaKnown RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 VAMP1P23763 118 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 IGFBP5P24593 272 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 CERS1P27544 350 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 FDFT1P37268 417 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 KIR2DL2P43627 348 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 UBASH3AP57075 661 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 SIRPAP78324 504 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 VLDLRP98155 873 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 CSHL1Q14406 222 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 SBSNQ6UWP8 590 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 CILP2Q8IUL8 1156 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 KLHDC8AQ8IYD2 350 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 OR56A3Q8NH54 315 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 LILRB1Q8NHL6 650 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 SPPL2AQ8TCT8 520 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 KCNJ9Q92806 393 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 CAVIN3Q969G5 261 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 CTHRC1Q96CG8 243 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 MS4A6EQ96DS6 147 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 LCORQ96JN0 433 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 KLHL4Q9C0H6 718 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 PARVBQ9HBI1 364 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 HEY2Q9UBP5 337 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 EXPH5Q8NEV8 1989 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 A0A0G2JK05 382 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 TCRBV7S2A1N4TA0A589 114 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 LRIT2A6NDA9 550 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 SYNDIG1LA6NDD5 238 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 PLOD2O00469 737 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 UBFD1O14562 309 aaKnown RBP8.28□□□□□ -1.08
SSBP1-212ENST00000489378 LMX1BO60663 402 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 SNX4O95219 450 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 CGAP01215 116 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 CRHP06850 196 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 C8GP07360 202 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 TBXA2RP21731 343 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 CHMP24386 653 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 SLC6A12P48065 614 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 PLA2G16P53816 162 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 STXBP1P61764 594 aaKnown RBP8.28□□□□□ -1.08
SSBP1-212ENST00000489378 FAPQ12884 760 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 SERTAD2Q14140 314 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 EFTUD2Q15029 972 aaKnown RBP eCLIP8.28□□□□□ -1.084e-17■□□□□ 11.1
SSBP1-212ENST00000489378 FAM120AOSQ5T036 256 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 TIGD3Q6B0B8 471 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 UGT3A1Q6NUS8 523 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 MILR1Q7Z6M3 343 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 TRIM42Q8IWZ5 723 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 OR4N5Q8IXE1 308 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 ZNF610Q8N9Z0 462 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 RAB3IL1Q8TBN0 382 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 EEF1AKMT1Q8WVE0 214 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 ATG4AQ8WYN0 398 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 PPWD1Q96BP3 646 aaKnown RBP8.28□□□□□ -1.08
SSBP1-212ENST00000489378 KRT12Q99456 494 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 AIF1LQ9BQI0 150 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 RHNO1Q9BSD3 238 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms