RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 E9PMD0 336 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 SGK494L7N484 410 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 TSPAN2O60636 221 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 MAGEC1O60732 1142 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 CGAP01215 116 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 FCER2P06734 321 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 FHP07954 510 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 MBL2P11226 248 aaPredicted RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 PTPN6P29350 595 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 PPP2R1AP30153 589 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 NDST1P52848 882 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 CRIP2P52943 208 aaPredicted RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 GNB1P62873 340 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 CDKL1Q00532 357 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 RBBP4Q09028 425 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 ZKSCAN8Q15776 578 aaPredicted RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 MRGPRG-AS1Q2M3A8 158 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 STEAP1BQ6NZ63 245 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 CES3Q6UWW8 571 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 CWC27Q6UX04 472 aaKnown RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 Q6ZSR9 355 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 ASRGL1Q7L266 308 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 GOLGA7Q7Z5G4 137 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 LCA5Q86VQ0 697 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 LINC00518Q8N0U6 118 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 GCNT2Q8N0V5 402 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 GVQW1Q8N7I0 195 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 FADS6Q8N9I5 356 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 MLKLQ8NB16 471 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 PNPLA2Q96AD5 504 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 CAPNS2Q96L46 248 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 ZNF300Q96RE9 604 aaPredicted RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 OVOL2Q9BRP0 275 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 WRAP53Q9BUR4 548 aaKnown RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 RAB33BQ9H082 229 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 MTHFD2LQ9H903 347 aaPredicted RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 STARD5Q9NSY2 213 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 KLHL8Q9P2G9 620 aaPredicted RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 XPO7Q9UIA9 1087 aaKnown RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 ZNF490Q9ULM2 529 aaPredicted RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 KLF2Q9Y5W3 355 aaPredicted RBP3.65□□□□□ -1.83
XRN1-213ENST00000489241 RNF215Q9Y6U7 377 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 LOC390937A0A1W2PQ73 354 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 H0YCG3 227 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 TNFSF12O43508 249 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 BUB1O43683 1085 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 IDH1O75874 414 aaKnown RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 STK17BO94768 372 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 OR4F21O95013 312 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 NDUFA7O95182 113 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 PRAMEF12O95522 483 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 CLDN1O95832 211 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 IGLV1-44P01699 117 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 RNF224P0DH78 156 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 THRBP10828 461 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 EPB41P11171 864 aaKnown RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 PRG2P13727 222 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 DPP4P27487 766 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 TRIM23P36406 574 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 MATKP42679 507 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 PTGFRP43088 359 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 TSFMP43897 325 aaKnown RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 ZFP36L2P47974 494 aaKnown RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 DHODHQ02127 395 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 SNTB2Q13425 540 aaKnown RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 NFATC2Q13469 925 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 SLC17A1Q14916 467 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 FAM189A2Q15884 450 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 ZNF699Q32M78 642 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 ANKRD55Q3KP44 614 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 USH1GQ495M9 461 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 NADK2Q4G0N4 442 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 ACSF3Q4G176 576 aaPredicted RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 PWWP2BQ6NUJ5 590 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 BHLHB9Q6PI77 547 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 KDELC1Q6UW63 502 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 DPY19L2P2Q6ZN68 376 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 GPR142Q7Z601 462 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 ZER1Q7Z7L7 766 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 UNC5CLQ8IV45 518 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 CENPLQ8N0S6 344 aaPredicted RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 WDSUB1Q8N9V3 476 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 ZNF248Q8NDW4 579 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 OR10T2Q8NGX3 314 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 OR6F1Q8NGZ6 308 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 WDR36Q8NI36 951 aaKnown RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 CNRIP1Q96F85 164 aaPredicted RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 GMPPAQ96IJ6 420 aaPredicted RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 KRT12Q99456 494 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 LITAFQ99732 161 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 RBM24Q9BX46 236 aaKnown RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 LRRCC1Q9C099 1032 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 NT5C3AQ9H0P0 336 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 DCTPP1Q9H773 170 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 PLEKHA3Q9HB20 300 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.64□□□□□ -1.83
XRN1-213ENST00000489241 TEX10Q9NXF1 929 aaPredicted RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 CHRNA9Q9UGM1 479 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 CHMP2BQ9UQN3 213 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms