RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CNR1P21554 472 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 VSNL1P62760 191 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 ADORA2A-AS1P86434 159 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 SLC15A4Q8N697 577 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 SH2D2AQ9NP31 389 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 SACM1LQ9NTJ5 587 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 A0A1B0GTH9 108 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 FAM166BA8MTA8 275 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 CDC40O60508 579 aaKnown RBP eCLIP23.06■■□□□ 1.28
HMGN1-217ENST00000489072 GUCY1B2O75343 617 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 PORP16435 677 aaPredicted RBP23.06■■□□□ 1.28
HMGN1-217ENST00000489072 CRHR1P34998 444 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 FOXA1P55317 472 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 RAE1P78406 368 aaKnown RBP23.06■■□□□ 1.28
HMGN1-217ENST00000489072 FUT7Q11130 342 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 DOLPP1Q86YN1 238 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 ZNF441Q8N8Z8 693 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 OR2W6PQ8NHA6 318 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 SPACA9Q96E40 222 aaPredicted RBP23.06■■□□□ 1.28
HMGN1-217ENST00000489072 CCDC126Q96EE4 140 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 FAM173AQ9BQD7 235 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 TTTY12Q9BZ98 90 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 PLSCR2Q9NRY7 297 aa23.06■■□□□ 1.28
HMGN1-217ENST00000489072 EXPH5Q8NEV8 1989 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 CDH16O75309 829 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 GLSO94925 669 aaPredicted RBP23.05■■□□□ 1.28
HMGN1-217ENST00000489072 S1PR1P21453 382 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 NT5EP21589 574 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 CCT5P48643 541 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 DNASE1L1P49184 302 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 NAGLUP54802 743 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 PPIAP62937 165 aaKnown RBP23.05■■□□□ 1.28
HMGN1-217ENST00000489072 TRA2BP62995 288 aaKnown RBP23.05■■□□□ 1.28
HMGN1-217ENST00000489072 HMGCS1Q01581 520 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 PLGLB1Q02325 96 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 DUSP2Q05923 314 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 CCDC153Q494R4 210 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 MTFR2Q6P444 385 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 SCIMPQ6UWF3 145 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 GK5Q6ZS86 529 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 FAM47EQ6ZV65 393 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 NCCRP1Q6ZVX7 275 aaPredicted RBP23.05■■□□□ 1.28
HMGN1-217ENST00000489072 MRGPRGQ86SM5 289 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 C4orf33Q8N1A6 199 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 ZNF615Q8N8J6 731 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 GBP7Q8N8V2 638 aaPredicted RBP23.05■■□□□ 1.28
HMGN1-217ENST00000489072 APIPQ96GX9 242 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 PHF12Q96QT6 1004 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 DEFB127Q9H1M4 99 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 MID1IP1Q9NPA3 183 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 HEY2Q9UBP5 337 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 MCM8Q9UJA3 840 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 GRID1Q9ULK0 1009 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 MEMO1Q9Y316 297 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 CACNA1CQ13936 2221 aa23.05■■□□□ 1.28
HMGN1-217ENST00000489072 ERAL1O75616 437 aaKnown RBP23.04■■□□□ 1.28
HMGN1-217ENST00000489072 PDE9AO76083 593 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 P04436 131 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 FBXO45P0C2W1 286 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 ESRRAP11474 423 aaPredicted RBP23.04■■□□□ 1.28
HMGN1-217ENST00000489072 KRT4P19013 534 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 SOX18P35713 384 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 PIGAP37287 484 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 FEN1P39748 380 aaKnown RBP23.04■■□□□ 1.28
HMGN1-217ENST00000489072 SLC18A2Q05940 514 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 MGAT2Q10469 447 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 FOXO1Q12778 655 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 FAM180BQ6P0A1 224 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 FRMD7Q6ZUT3 714 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 PAQR8Q8TEZ7 354 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 ZDHHC11Q9H8X9 412 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 TUBA8Q9NY65 449 aaPredicted RBP23.04■■□□□ 1.28
HMGN1-217ENST00000489072 NCKAP5O14513 1909 aa23.04■■□□□ 1.28
HMGN1-217ENST00000489072 C2orf92A0A1B0GVN3 265 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 COPEO14579 308 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 ADAM10O14672 748 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 PCDH7O60245 1069 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 PTGS2P35354 604 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 DEKP35659 375 aaKnown RBP23.03■■□□□ 1.28
HMGN1-217ENST00000489072 ALDH9A1P49189 494 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 DNAJB13P59910 316 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 PRICKLE4Q2TBC4 344 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 FAM111BQ6SJ93 734 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 RPTNQ6XPR3 784 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 TMEM64Q6YI46 380 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 C3P1Q6ZMU1 363 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 ZNF808Q8N4W9 903 aaPredicted RBP23.03■■□□□ 1.28
HMGN1-217ENST00000489072 OR10G3Q8NGC4 313 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 KLHL29Q96CT2 875 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 C11orf24Q96F05 449 aaPredicted RBP23.03■■□□□ 1.28
HMGN1-217ENST00000489072 FAIM2Q9BWQ8 316 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 OR10A5Q9H207 317 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 TNFRSF12AQ9NP84 129 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 OXSMQ9NWU1 459 aa23.03■■□□□ 1.28
HMGN1-217ENST00000489072 CHCHD2Q9Y6H1 151 aaPredicted RBP23.03■■□□□ 1.28
HMGN1-217ENST00000489072 SERTM1A2A2V5 107 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 GOLGA6L10A6NI86 522 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 ACOT7O00154 380 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 PRRG2O14669 202 aa23.02■■□□□ 1.28
HMGN1-217ENST00000489072 ATP1B1P05026 303 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms