RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CCDC162PA2VCL2 907 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 OR5K3A6NET4 321 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 GOLGA8TH3BQL2 631 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 TMEM178BH3BS89 294 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ABCD4O14678 606 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 POLR1CO15160 346 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 TIMM8AO60220 97 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 DFNA5O60443 496 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CABYRO75952 493 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 STK17BO94768 372 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 SORBS2O94875 1100 aaKnown RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 SOX30O94993 753 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 PGK1P00558 417 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 LYNP07948 512 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CLTAP09496 248 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 TROVE2P10155 538 aaKnown RBP eCLIP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ACP2P11117 423 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 NEFHP12036 1026 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF23P17027 643 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF3P17036 446 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 PSMA2P25787 234 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 LAP3P28838 519 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 STX2P32856 288 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 RORAP35398 523 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 FDFT1P37268 417 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 MNDAP41218 407 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 NPY2RP49146 381 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 FOXG1P55316 489 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CLDN17P56750 224 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 PITX1P78337 314 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CX3CL1P78423 397 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ZFP36L1Q07352 338 aaKnown RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 MERTKQ12866 999 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 SLC10A2Q12908 348 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 XRCC4Q13426 336 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 EXOSC2Q13868 293 aaKnown RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 WDR43Q15061 677 aaKnown RBP eCLIP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 RBBP5Q15291 538 aaKnown RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 OR1C1Q15619 314 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 PHKG1Q16816 387 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF284Q2VY69 593 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ALKBH6Q3KRA9 238 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 SLC9C1Q4G0N8 1177 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 WLSQ5T9L3 541 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 LYPLAL1Q5VWZ2 237 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 LIPNQ5VXI9 398 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF776Q68DI1 518 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CLEC6AQ6EIG7 209 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 C11orf87Q6NUJ2 197 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CDC42EP5Q6NZY7 148 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 WASH2PQ6VEQ5 465 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ANO5Q75V66 913 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 COX8CQ7Z4L0 72 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 SCD5Q86SK9 330 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 LINC00523Q86TU6 105 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 NKAIN4Q8IVV8 208 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 TRPV1Q8NER1 839 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 OR11H4Q8NGC9 324 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 SPATA22Q8NHS9 363 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 NANPQ8TBE9 248 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 GPX8Q8TED1 209 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ST8SIA1Q92185 356 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ELMO1Q92556 727 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 RPL36ALQ969Q0 106 aaKnown RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 TM4SF19Q96DZ7 209 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 HPDLQ96IR7 371 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF479Q96JC4 524 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 LMLNQ96KR4 655 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CATSPER2Q96P56 530 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 TGM7Q96PF1 710 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 DEFB118Q96PH6 123 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ACCSQ96QU6 501 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 PANX2Q96RD6 677 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CCT8L2Q96SF2 557 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 AGPAT1Q99943 283 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 KXD1Q9BQD3 176 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 CCM2Q9BSQ5 444 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 SLC26A1Q9H2B4 701 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 BLZF1Q9H2G9 400 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 DCTPP1Q9H773 170 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 PCDH9Q9HC56 1237 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 MCCC2Q9HCC0 563 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ZNF160Q9HCG1 818 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 MRPS30Q9NP92 439 aaKnown RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 THSD1Q9NS62 852 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 POT1Q9NUX5 634 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 NUDT15Q9NV35 164 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 SLC2A8Q9NY64 477 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 PTTG2Q9NZH5 202 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 DAPK2Q9UIK4 370 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ERRFI1Q9UJM3 462 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ADAM28Q9UKQ2 775 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ANGPTL2Q9UKU9 493 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 EMCNQ9ULC0 261 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 BARX2Q9UMQ3 279 aaPredicted RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 ST3GAL5Q9UNP4 418 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 DIMT1Q9UNQ2 313 aaKnown RBP3.07□□□□□ -1.92
PRPF4-203ENST00000488937 RNF6Q9Y252 685 aa3.07□□□□□ -1.92
PRPF4-203ENST00000488937 KLHDC2Q9Y2U9 406 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms