RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ATP5A1P25705 553 aaKnown RBP18.21■□□□□ 0.51
CCM2-216ENST00000488727 TGM3Q08188 693 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 GK3PQ14409 553 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 OR4C11Q6IEV9 310 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 MRPL14Q6P1L8 145 aaKnown RBP18.21■□□□□ 0.51
CCM2-216ENST00000488727 MSANTD1Q6ZTZ1 278 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 VASH2Q86V25 355 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 OR52E4Q8NGH9 312 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 ZNF583Q96ND8 569 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 TSC22D3Q99576 134 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 VAPAQ9P0L0 249 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 TRPC4Q9UBN4 977 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 VPS29Q9UBQ0 182 aa18.21■□□□□ 0.51
CCM2-216ENST00000488727 ARHGAP10A1A4S6 786 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 SAC3D1A6NKF1 404 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 TAF4O00268 1085 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 SCELO95171 688 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 RASAL1O95294 804 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 HIST1H1TP22492 207 aaPredicted RBP18.2■□□□□ 0.5
CCM2-216ENST00000488727 DLSTP36957 453 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 EIF2S3P41091 472 aaKnown RBP18.2■□□□□ 0.5
CCM2-216ENST00000488727 SSR2P43308 183 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 ARFIP1P53367 373 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 POLE2P56282 527 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 FOXK2Q01167 660 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 RUNX2Q13950 521 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 NCF4Q15080 339 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 RUNDC3AQ59EK9 446 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 LRIF1Q5T3J3 769 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 FAM69BQ5VUD6 431 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 MLIPQ5VWP3 458 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 NIPAL1Q6NVV3 410 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 OVCH1Q7RTY7 1134 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 MSRB3Q8IXL7 192 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 METTL4Q8N3J2 472 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 ACOT4Q8N9L9 421 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 NUDT8Q8WV74 236 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 FKBP10Q96AY3 582 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 TESCQ96BS2 214 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 SERINC2Q96SA4 455 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 GORASP2Q9H8Y8 452 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 ZNF639Q9UID6 485 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 IGLV3-12A0A075B6K2 115 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 C9J4A7 227 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 ACOX3O15254 700 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 ERN1O75460 977 aaKnown RBP18.2■□□□□ 0.5
CCM2-216ENST00000488727 RPL5P46777 297 aaKnown RBP18.2■□□□□ 0.5
CCM2-216ENST00000488727 SKP1P63208 163 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 DNASE1L3Q13609 305 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 VWA2Q5GFL6 755 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 RIMKLAQ8IXN7 391 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 CBR4Q8N4T8 237 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 KRTCAP2Q8N6L1 136 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 OR51Q1Q8NH59 317 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 ZCCHC14Q8WYQ9 949 aaKnown RBP18.2■□□□□ 0.5
CCM2-216ENST00000488727 TFAP2CQ92754 450 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 APIPQ96GX9 242 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 SLC26A1Q9H2B4 701 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 WDR70Q9NW82 654 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 IL17BQ9UHF5 180 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 DLGAP4Q9Y2H0 992 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 RAXQ9Y2V3 346 aa18.2■□□□□ 0.5
CCM2-216ENST00000488727 NUP210LQ5VU65 1888 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 A0A096LPI6 279 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 DLGAP1O14490 977 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 CHST10O43529 356 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 B3GALT2O43825 422 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 LDLRP01130 860 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 GBAP04062 536 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 FESP07332 822 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 LIFP15018 202 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 HOXB9P17482 250 aaPredicted RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 ZNF10P21506 573 aaPredicted RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 TSFMP43897 325 aaKnown RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 NKG7Q16617 165 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 COMMD6Q7Z4G1 85 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 CA13Q8N1Q1 262 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 C1orf52Q8N6N3 182 aaKnown RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 OR2T12Q8NG77 320 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 CHTF18Q8WVB6 975 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 OR52E6Q96RD3 313 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 YIPF2Q9BWQ6 316 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 ROGDIQ9GZN7 287 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 PAIP1Q9H074 479 aaKnown RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 DDX31Q9H8H2 851 aaKnown RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 PNPLA3Q9NST1 481 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 SLC25A37Q9NYZ2 338 aa18.19■□□□□ 0.5
CCM2-216ENST00000488727 ZNF282Q9UDV7 671 aaPredicted RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 MRPS18BQ9Y676 258 aaKnown RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 URB1O60287 2271 aaKnown RBP18.19■□□□□ 0.5
CCM2-216ENST00000488727 CFAP47Q6ZTR5 3102 aa18.18■□□□□ 0.5
CCM2-216ENST00000488727 A0A0A6YYD5 115 aa18.18■□□□□ 0.5
CCM2-216ENST00000488727 C21orf140B9A014 251 aa18.18■□□□□ 0.5
CCM2-216ENST00000488727 KLK10O43240 276 aa18.18■□□□□ 0.5
CCM2-216ENST00000488727 AHCYL1O43865 530 aa18.18■□□□□ 0.5
CCM2-216ENST00000488727 TPST1O60507 370 aa18.18■□□□□ 0.5
CCM2-216ENST00000488727 JRKO75564 520 aa18.18■□□□□ 0.5
CCM2-216ENST00000488727 KLF7O75840 302 aaPredicted RBP18.18■□□□□ 0.5
CCM2-216ENST00000488727 CLPTM1O96005 669 aa18.18■□□□□ 0.5
CCM2-216ENST00000488727 ALBP02768 609 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms