RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NARFQ9UHQ1 456 aa2.59□□□□□ -1.99
CD46-215ENST00000488596 TSPAN16Q9UKR8 245 aa2.59□□□□□ -1.99
CD46-215ENST00000488596 IKZF3Q9UKT9 509 aa2.59□□□□□ -1.99
CD46-215ENST00000488596 RARRES3Q9UL19 164 aa2.59□□□□□ -1.99
CD46-215ENST00000488596 RPH3AQ9Y2J0 694 aaPredicted RBP2.59□□□□□ -1.99
CD46-215ENST00000488596 KLHDC2Q9Y2U9 406 aa2.59□□□□□ -1.99
CD46-215ENST00000488596 MRPS2Q9Y399 296 aaKnown RBP2.59□□□□□ -1.99
CD46-215ENST00000488596 CPQQ9Y646 472 aa2.59□□□□□ -1.99
CD46-215ENST00000488596 NPC1L1Q9UHC9 1359 aa2.59□□□□□ -2
CD46-215ENST00000488596 TRBV2A0A0J9YWF9 115 aa2.58□□□□□ -2
CD46-215ENST00000488596 A0A1W2PNU3 283 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 SLC9B1P1A6NJY1 282 aa2.58□□□□□ -2
CD46-215ENST00000488596 ACOD1A6NK06 481 aa2.58□□□□□ -2
CD46-215ENST00000488596 SRRM5B3KS81 715 aa2.58□□□□□ -2
CD46-215ENST00000488596 CHEK1O14757 476 aa2.58□□□□□ -2
CD46-215ENST00000488596 NME2P1O60361 137 aa2.58□□□□□ -2
CD46-215ENST00000488596 TSPAN2O60636 221 aa2.58□□□□□ -2
CD46-215ENST00000488596 LRP3O75074 770 aa2.58□□□□□ -2
CD46-215ENST00000488596 HCKP08631 526 aa2.58□□□□□ -2
CD46-215ENST00000488596 HOXD4P09016 255 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 CCDC159P0C7I6 412 aa2.58□□□□□ -2
CD46-215ENST00000488596 ZCCHC18P0CG32 403 aa2.58□□□□□ -2
CD46-215ENST00000488596 ACADSP16219 412 aa2.58□□□□□ -2
CD46-215ENST00000488596 STMN1P16949 149 aa2.58□□□□□ -2
CD46-215ENST00000488596 AHCYP23526 432 aa2.58□□□□□ -2
CD46-215ENST00000488596 MARCKSP29966 332 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 ZNF131P52739 623 aa2.58□□□□□ -2
CD46-215ENST00000488596 RAG2P55895 527 aa2.58□□□□□ -2
CD46-215ENST00000488596 KRTAP12-2P59991 146 aa2.58□□□□□ -2
CD46-215ENST00000488596 ZFP36L1Q07352 338 aaKnown RBP2.58□□□□□ -2
CD46-215ENST00000488596 WASHC5Q12768 1159 aa2.58□□□□□ -2
CD46-215ENST00000488596 KLF5Q13887 457 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 CYLC2Q14093 348 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 BTG3Q14201 252 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 EMC2Q15006 297 aa2.58□□□□□ -2
CD46-215ENST00000488596 PDK1Q15118 436 aa2.58□□□□□ -2
CD46-215ENST00000488596 UNC50Q53HI1 259 aa2.58□□□□□ -2
CD46-215ENST00000488596 WDR25Q64LD2 544 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 HIST2H2AA3Q6FI13 130 aa2.58□□□□□ -2
CD46-215ENST00000488596 OR6B2Q6IFH4 312 aa2.58□□□□□ -2
CD46-215ENST00000488596 PHC2Q8IXK0 858 aa2.58□□□□□ -2
CD46-215ENST00000488596 LMNTD2Q8IXW0 634 aa2.58□□□□□ -2
CD46-215ENST00000488596 KIAA1524Q8TCG1 905 aa2.58□□□□□ -2
CD46-215ENST00000488596 FBXO25Q8TCJ0 367 aa2.58□□□□□ -2
CD46-215ENST00000488596 P3H4Q92791 437 aa2.58□□□□□ -2
CD46-215ENST00000488596 CAPNS2Q96L46 248 aa2.58□□□□□ -2
CD46-215ENST00000488596 DEFB118Q96PH6 123 aa2.58□□□□□ -2
CD46-215ENST00000488596 COQ7Q99807 217 aa2.58□□□□□ -2
CD46-215ENST00000488596 SPAG8Q99932 426 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 TRIM6Q9C030 488 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 XPO4Q9C0E2 1151 aaKnown RBP2.58□□□□□ -2
CD46-215ENST00000488596 ADGRL4Q9HBW9 690 aa2.58□□□□□ -2
CD46-215ENST00000488596 HPS4Q9NQG7 708 aa2.58□□□□□ -2
CD46-215ENST00000488596 ZNF446Q9NWS9 450 aa2.58□□□□□ -2
CD46-215ENST00000488596 RCOR3Q9P2K3 495 aaPredicted RBP2.58□□□□□ -2
CD46-215ENST00000488596 TRIM10Q9UDY6 481 aa2.58□□□□□ -2
CD46-215ENST00000488596 DNPEPQ9ULA0 475 aa2.58□□□□□ -2
CD46-215ENST00000488596 SLC6A5Q9Y345 797 aa2.58□□□□□ -2
CD46-215ENST00000488596 SPAG9O60271 1321 aaKnown RBP2.58□□□□□ -2
CD46-215ENST00000488596 IGHV3-16A0A0C4DH30 117 aa2.57□□□□□ -2
CD46-215ENST00000488596 A0A1B0GTH9 108 aa2.57□□□□□ -2
CD46-215ENST00000488596 TMEM89A2RUT3 159 aa2.57□□□□□ -2
CD46-215ENST00000488596 PHF1O43189 567 aaPredicted RBP2.57□□□□□ -2
CD46-215ENST00000488596 SYNGR4O95473 234 aa2.57□□□□□ -2
CD46-215ENST00000488596 OAS1P00973 400 aaKnown RBP2.57□□□□□ -2
CD46-215ENST00000488596 MT-ND1P03886 318 aa2.57□□□□□ -2
CD46-215ENST00000488596 FCER2P06734 321 aa2.57□□□□□ -2
CD46-215ENST00000488596 HIST1H2AGP0C0S8 130 aaPredicted RBP2.57□□□□□ -2
CD46-215ENST00000488596 FOSL2P15408 326 aa2.57□□□□□ -2
CD46-215ENST00000488596 GNSP15586 552 aa2.57□□□□□ -2
CD46-215ENST00000488596 GATA1P15976 413 aaPredicted RBP2.57□□□□□ -2
CD46-215ENST00000488596 HSPA1LP34931 641 aa2.57□□□□□ -2
CD46-215ENST00000488596 SPRP35270 261 aaPredicted RBP2.57□□□□□ -2
CD46-215ENST00000488596 ALDH3B1P43353 468 aa2.57□□□□□ -2
CD46-215ENST00000488596 CCL11P51671 97 aa2.57□□□□□ -2
CD46-215ENST00000488596 ZKSCAN8Q15776 578 aaPredicted RBP2.57□□□□□ -2
CD46-215ENST00000488596 ZNF239Q16600 458 aaKnown RBP2.57□□□□□ -2
CD46-215ENST00000488596 CCL14Q16627 93 aa2.57□□□□□ -2
CD46-215ENST00000488596 HERC4Q5GLZ8 1057 aaPredicted RBP2.57□□□□□ -2
CD46-215ENST00000488596 DDI2Q5TDH0 399 aa2.57□□□□□ -2
CD46-215ENST00000488596 C1orf189Q5VU69 101 aa2.57□□□□□ -2
CD46-215ENST00000488596 AGAP7PQ5VUJ5 663 aa2.57□□□□□ -2
CD46-215ENST00000488596 RFWD3Q6PCD5 774 aa2.57□□□□□ -2
CD46-215ENST00000488596 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.57□□□□□ -2
CD46-215ENST00000488596 BATF2Q8N1L9 274 aa2.57□□□□□ -2
CD46-215ENST00000488596 FAM222BQ8WU58 562 aa2.57□□□□□ -2
CD46-215ENST00000488596 HIST1H2ACQ93077 130 aa2.57□□□□□ -2
CD46-215ENST00000488596 RAB11FIP5Q9BXF6 653 aa2.57□□□□□ -2
CD46-215ENST00000488596 NLNQ9BYT8 704 aa2.57□□□□□ -2
CD46-215ENST00000488596 PUS3Q9BZE2 481 aaKnown RBP2.57□□□□□ -2
CD46-215ENST00000488596 SIRPDQ9H106 197 aa2.57□□□□□ -2
CD46-215ENST00000488596 ABCG8Q9H221 673 aa2.57□□□□□ -2
CD46-215ENST00000488596 TNMDQ9H2S6 317 aa2.57□□□□□ -2
CD46-215ENST00000488596 RNF41Q9H4P4 317 aaPredicted RBP2.57□□□□□ -2
CD46-215ENST00000488596 SLC7A10Q9NS82 523 aa2.57□□□□□ -2
CD46-215ENST00000488596 IL19Q9UHD0 177 aa2.57□□□□□ -2
CD46-215ENST00000488596 SPATA2Q9UM82 520 aa2.57□□□□□ -2
CD46-215ENST00000488596 ENTPD4Q9Y227 616 aa2.57□□□□□ -2
CD46-215ENST00000488596 ATG4BQ9Y4P1 393 aa2.57□□□□□ -2
CD46-215ENST00000488596 GPRASP1Q5JY77 1395 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms