RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 CXCR4P61073 352 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 PPP1CAP62136 330 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 RPP38P78345 283 aaKnown RBP6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 HHEXQ03014 270 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 NPRL3Q12980 569 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 RAPSNQ13702 412 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 GNA13Q14344 377 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ELOCQ15369 112 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 EXOC3L2Q2M3D2 409 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 DEFB134Q4QY38 66 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 TCTN3Q6NUS6 607 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ARMC6Q6NXE6 501 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZNF773Q6PK81 442 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 TMEM107Q6UX40 140 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 OOSP2Q86WS3 158 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 MCATQ8IVS2 390 aaKnown RBP6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 SLC44A2Q8IWA5 706 aaPredicted RBP6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ALDH16A1Q8IZ83 802 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 SIX5Q8N196 739 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 SDR16C5Q8N3Y7 309 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ARHGEF39Q8N4T4 335 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 DNAJC22Q8N4W6 341 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 SLC5A8Q8N695 610 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZNF655Q8N720 491 aaPredicted RBP6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 TTC29Q8NA56 475 aaPredicted RBP6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ATG16L2Q8NAA4 619 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 AVL9Q8NBF6 648 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 SETD9Q8NE22 299 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 NUP43Q8NFH3 380 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 OR9A2Q8NGT5 310 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 BBS10Q8TAM1 723 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 RASSF5Q8WWW0 418 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 RERGQ96A58 199 aaPredicted RBP6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 GIMAP5Q96F15 307 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 SLC35A4Q96G79 324 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 MAGED4Q96JG8 741 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 CNDP2Q96KP4 475 aaKnown RBP6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 DHRS1Q96LJ7 313 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZNF354BQ96LW1 612 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 TSC22D3Q99576 134 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 PITX2Q99697 317 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 SPATA5L1Q9BVQ7 753 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 GABARAPL3Q9BY60 117 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 ING2Q9H160 280 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 RIBC2Q9H4K1 309 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 FAM60AQ9NP50 221 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 KRT84Q9NSB2 600 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 THEGQ9P2T0 379 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 P2RX2Q9UBL9 471 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 TRPC4Q9UBN4 977 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 KCND3Q9UK17 655 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 FBXL21Q9UKT6 434 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 POMT2Q9UKY4 750 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 LIPT1Q9Y234 373 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 FAM32AQ9Y421 112 aaKnown RBP6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 KCNE3Q9Y6H6 103 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 COMMD3-BMI1R4GMX3 469 aa6.34□□□□□ -1.39
RN7SL561P-201ENST00000488553 CEP290O15078 2479 aa6.34□□□□□ -1.4
RN7SL561P-201ENST00000488553 NUMA1Q14980 2115 aa6.34□□□□□ -1.4
RN7SL561P-201ENST00000488553 F5P12259 2224 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 ARRDC5A6NEK1 342 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 SLC9B1P1A6NJY1 282 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 DUXAA6NLW8 204 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 B4DGG1 531 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 HCRTR1O43613 425 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 SRPX2O60687 465 aaPredicted RBP6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 SEMA7AO75326 666 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 CCNB2O95067 398 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 GADD45GO95257 159 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 GPR75O95800 540 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 EPPINO95925 133 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 LGI1O95970 557 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 EIF2S1P05198 315 aaKnown RBP6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 CHRM4P08173 479 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 IFI6P09912 130 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 CCDC159P0C7I6 412 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 ALPPL2P10696 532 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 CPMP14384 443 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 ST6GAL1P15907 406 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 PORP16435 677 aaPredicted RBP6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 AGXTP21549 392 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 FUT4P22083 530 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 MAOBP27338 520 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 EPHA2P29317 976 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 PPP2R1BP30154 601 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 TTKP33981 857 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 MC3RP41968 323 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 CDH12P55289 794 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 TPD52P55327 224 aaPredicted RBP6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 MAZP56270 477 aaKnown RBP6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 VSX2P58304 361 aaPredicted RBP6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 NXPH1P58417 271 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 GABARAPL2P60520 117 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 ESRRGP62508 458 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 SIM1P81133 766 aaPredicted RBP6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 PRR5P85299 388 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 SPIBQ01892 262 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 MGAT2Q10469 447 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 FUT5Q11128 374 aa6.33□□□□□ -1.4
RN7SL561P-201ENST00000488553 PMS2P3Q13401 168 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms